RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ZNF425Q6IV72 752 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 SUMF2Q8NBJ7 301 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 FAM83FQ8NEG4 500 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 PMEPA1Q969W9 287 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 MFFQ9GZY8 342 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ATG4BQ9Y4P1 393 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3DA0A087WVF3 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3IA0A087WXS9 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3EA0A087X179 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3KA0A087X1G2 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3FA6NER0 549 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3LB9A6J9 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ZNF821O75541 412 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3HP0C7X1 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 GGT5P36269 586 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ARL2P36404 184 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 MFSD13AQ14CX5 517 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 PRAMEF14Q5SWL7 426 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3GQ6DHY5 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3CQ6IPX1 549 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 TBC1D3Q8IZP1 549 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 PARP16Q8N5Y8 322 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 PAQR8Q8TEZ7 354 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 PXDNQ92626 1479 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 BORCS8Q96FH0 119 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ALDOAP04075 364 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 SOX2P48431 317 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 DAOAP59103 153 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 BEX3Q00994 111 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 IRF5Q13568 498 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 P2RX7Q99572 595 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 SEC61A2Q9H9S3 476 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 GOLGA2P5Q9HBQ8 144 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ARVCFO00192 962 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ZBTB48P10074 688 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 MTNR1AP48039 350 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 CFAP77Q6ZQR2 320 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 THAP4Q8WY91 577 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 ZNF514Q96K75 400 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 GLTPQ9NZD2 209 aa11.92□□□□□ -0.5
SRGAP3-202ENST00000383836 WASHC1A8K0Z3 465 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SHOXO15266 292 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 FGF19O95750 216 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 GLIS1Q8NBF1 620 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 FBXO15Q8NCQ5 510 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 OR4C15Q8NGM1 316 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 OR13C3Q8NGS6 347 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 MYOCQ99972 504 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 WASH6PQ9NQA3 447 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 PTTG3PQ9NZH4 202 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ATG2BQ96BY7 2078 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 C1orf167Q5SNV9 1468 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 RAD51DO75771 328 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 GGT1P19440 569 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 RPS5P46782 204 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 HCAR3P49019 387 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 DIO3P55073 304 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SAMD11Q96NU1 681 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 CCM2Q9BSQ5 444 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 RETREG1Q9H6L5 497 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ECM29Q5VYK3 1845 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 AMZ2Q86W34 360 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 PROKR1Q8TCW9 393 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 NT5C3BQ969T7 300 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ZNF599Q96NL3 588 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ACBD6Q9BR61 282 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 THAP7Q9BT49 309 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SPATA31A1Q5TZJ5 1347 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ARAP2Q8WZ64 1704 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 EPOP01588 193 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 MOAP1Q96BY2 351 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SARDHQ9UL12 918 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 FAM230AA0A1W2PPH8 454 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SLC22A31A6NKX4 558 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 CAPNS1P04632 268 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 CRISP1P54107 249 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SELPLGQ14242 412 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 PCGF3Q3KNV8 242 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 AGAP7PQ5VUJ5 663 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ZNF597Q96LX8 424 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ZNF558Q96NG5 402 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 AMY2AP04746 511 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 CYP27C1Q4G0S4 372 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ESCO2Q56NI9 601 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ACBD7Q8N6N7 88 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 BOLLQ8N9W6 283 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 ZNF419Q96HQ0 510 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 SRMSQ9H3Y6 488 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 NT5DC2Q9H857 520 aa11.91□□□□□ -0.5
SRGAP3-202ENST00000383836 PCBP2Q15366 365 aaKnown RBP eCLIP11.9□□□□□ -0.5
SRGAP3-202ENST00000383836 RAB11BQ15907 218 aa11.9□□□□□ -0.5
SRGAP3-202ENST00000383836 FAM83HQ6ZRV2 1179 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-202ENST00000383836 KRTCAP2Q8N6L1 136 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms