RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 STK11Q15831 433 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 KLHL12Q53G59 568 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 IDNKQ5T6J7 187 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 CNKSR3Q6P9H4 555 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 PIGKQ92643 395 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 CIDECQ96AQ7 238 aaPredicted RBP13.17□□□□□ -0.3
SDC1-202ENST00000381150 LMLNQ96KR4 655 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
SDC1-202ENST00000381150 RBFOX1Q9NWB1 397 aaKnown RBP13.17□□□□□ -0.3
SDC1-202ENST00000381150 VPS29Q9UBQ0 182 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 PLXNB3Q9ULL4 1909 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 CD8B2A6NJW9 211 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 AGAP14A8MT82 685 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 ALPPP05187 535 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 NR2F6P10588 404 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 CD8BP10966 210 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 XKP51811 444 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 SNTA1Q13424 505 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 CLEC12AQ5QGZ9 265 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 HTR3DQ70Z44 454 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 ZNF680Q8NEM1 530 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 USP7Q93009 1102 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 SLC25A46Q96AG3 418 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 NUDT15Q9NV35 164 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 POM121CA8CG34 1229 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 IFNW1P05000 195 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 BPIP17213 487 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 IL1RNP18510 177 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 CELP19835 753 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 RBBP4Q09028 425 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 GALEQ14376 348 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 GPRC6AQ5T6X5 926 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 ADGRD2Q7Z7M1 963 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 NPAS3Q8IXF0 933 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 OR4M2Q8NGB6 313 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 DNAJB8Q8NHS0 232 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.17□□□□□ -0.3
SDC1-202ENST00000381150 CSGALNACT1Q8TDX6 532 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 REPS1Q96D71 796 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 TOX2Q96NM4 488 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 SLAMF7Q9NQ25 335 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 SLC30A4O14863 429 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 SSNA1O43805 119 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 TRAPPC2P0DI81 140 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 TRAPPC2BP0DI82 140 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 DEFB103AP81534 67 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 CDK6Q00534 326 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 COX10Q12887 443 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 LMAN2Q12907 356 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 HEPACAMQ14CZ8 416 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 GCNT6Q5T4J0 391 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 TSEN54Q7Z6J9 526 aaKnown RBP13.16□□□□□ -0.3
SDC1-202ENST00000381150 SLC30A8Q8IWU4 369 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 TCTE3Q8IZS6 198 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 RAB8BQ92930 207 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 LRR1Q96L50 414 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 RAD9AQ99638 391 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 NTMT1Q9BV86 223 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 C2orf49Q9BVC5 232 aaPredicted RBP13.16□□□□□ -0.3
SDC1-202ENST00000381150 CDCA4Q9BXL8 241 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 SPRTNQ9H040 489 aaPredicted RBP13.16□□□□□ -0.3
SDC1-202ENST00000381150 ABCG5Q9H222 651 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 B3GAT2Q9NPZ5 323 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 KLHL21Q9UJP4 597 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 RFPL3O75679 317 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 ACRV1P26436 265 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 CD70P32970 193 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 VSX2P58304 361 aaPredicted RBP13.16□□□□□ -0.3
SDC1-202ENST00000381150 GLYR1Q49A26 553 aaPredicted RBP13.16□□□□□ -0.3
SDC1-202ENST00000381150 SPOUT1Q5T280 376 aaKnown RBP13.16□□□□□ -0.3
SDC1-202ENST00000381150 ZBTB37Q5TC79 503 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 RETSATQ6NUM9 610 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 TOR1AIP2Q8NFQ8 470 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
SDC1-202ENST00000381150 SLC9A6Q92581 669 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 GDF15Q99988 308 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 SGK2Q9HBY8 427 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 KLHL1Q9NR64 748 aa13.16□□□□□ -0.3
SDC1-202ENST00000381150 GLYATL1P3A0A0U1RQE8 302 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 HYKKA2RU49 373 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 ANKDD1BA6NHY2 528 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 HOXB6P17509 224 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 NNMTP40261 264 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 HBA1P69905 142 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 SLC7A9P82251 487 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 TAGLNQ01995 201 aaKnown RBP13.15□□□□□ -0.3
SDC1-202ENST00000381150 MPPE1Q53F39 396 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 MPP7Q5T2T1 576 aa13.15□□□□□ -0.3
SDC1-202ENST00000381150 MARCH9Q86YJ5 346 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms