RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PRSS33Q8NF86 280 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 OR7A2PQ8NGA2 310 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 OR10Q1Q8NGQ4 319 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SAP25Q8TEE9 199 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ZFP90Q8TF47 636 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 HIST1H2AHQ96KK5 128 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 HRASLS5Q96KN8 279 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PKP4Q99569 1192 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 HIST1H2AJQ99878 128 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 H2AFJQ9BTM1 129 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 BRF2Q9HAW0 419 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PLCXD1Q9NUJ7 323 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 GIN1Q9NXP7 522 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 STOX2Q9P2F5 926 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 BTNL2Q9UIR0 455 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PCDHGA6Q9Y5G7 932 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SNX11Q9Y5W9 270 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 COL27A1Q8IZC6 1860 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ZNF318Q5VUA4 2279 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 SCAMP2O15127 329 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 KRT6AP02538 564 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 KRT6BP04259 564 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 MAP4P27816 1152 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 IMPA1P29218 277 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 KRT6CP48668 564 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 ARRB1P49407 418 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 MAPK10P53779 464 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 TEKQ02763 1124 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 PLAURQ03405 335 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 PDE7AQ13946 482 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 FRG2Q64ET8 278 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 ADNP2Q6IQ32 1131 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 GRHL2Q6ISB3 625 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 LCTLQ6UWM7 567 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 CCDC80Q76M96 950 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 VTCN1Q7Z7D3 282 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 TSPYL5Q86VY4 417 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 RAB42Q8N4Z0 105 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 ZNF555Q8NEP9 628 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 CHTF18Q8WVB6 975 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 NKD1Q969G9 470 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 GTPBP3Q969Y2 492 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 FRG2BQ96QU4 278 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 MYOCQ99972 504 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 SARGQ9BW04 601 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 REXO4Q9GZR2 422 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 CHRNA10Q9GZZ6 450 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 RAD21L1Q9H4I0 556 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 TBC1D23Q9NUY8 699 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 FAM120CQ9NX05 1096 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 OR6C2Q9NZP2 312 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 ZNF624Q9P2J8 865 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 AASSQ9UDR5 926 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 SNX6Q9UNH7 406 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 CLDN24A6NM45 220 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 A8MVJ9 347 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 M0R082 166 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 HS6ST1O60243 411 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 BCL10O95999 233 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 GSNP06396 782 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 BMP4P12644 408 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 PRPS1L1P21108 318 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 MAOBP27338 520 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 S100A3P33764 101 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 KDELR2P33947 212 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 PCGF2P35227 344 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 CSNK1EP49674 416 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 CPSF6Q16630 551 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 SMN1Q16637 294 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 MPEG1Q2M385 716 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 NAGSQ8N159 534 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 OR6Q1Q8NGQ2 317 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 SH3KBP1Q96B97 665 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 MTFMTQ96DP5 389 aaKnown RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 TCEAL2Q9H3H9 227 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-202ENST00000379996 NT5DC2Q9H857 520 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 KCNK6Q9Y257 313 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 PRKAB1Q9Y478 270 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 PLEKHM1Q9Y4G2 1056 aa7.32□□□□□ -1.24
CDKL5-202ENST00000379996 A0A1B0GVT2 93 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 E7EQ34 232 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 SLC22A1O15245 554 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 ZNF806P0C7X5 589 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 CTSEP14091 401 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 ENGP17813 658 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 PBLDP30039 288 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-202ENST00000379996 HPCAL1P37235 193 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 MAP2K4P45985 399 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 RAB28P51157 221 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 PSMD7P51665 324 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 PNLIPRP1P54315 467 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 TMED1Q13445 227 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 YOD1Q5VVQ6 348 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-202ENST00000379996 GALNT10Q86SR1 603 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 CLECL1Q8IZS7 167 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 DEFB119Q8N690 84 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 SELENOMQ8WWX9 145 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 RHOVQ96L33 236 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 CAMK1GQ96NX5 476 aa7.31□□□□□ -1.24
CDKL5-202ENST00000379996 TSSK3Q96PN8 268 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms