RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CAB39LQ9H9S4 337 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 PCDHGB3Q9Y5G1 929 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 ALOX15P16050 662 aaPredicted RBP16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 CD53P19397 219 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 CPA2P48052 419 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 RAP1GDS1P52306 607 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 FBXW4P57775 412 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 MGAT5Q09328 741 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 SLAMF1Q13291 335 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 LAPTM5Q13571 262 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 DCST1Q5T197 706 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 STEAP4Q687X5 459 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 LUZP2Q86TE4 346 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 TCAIMQ8N3R3 496 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 LRRN4CLQ8ND94 238 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 ZNF473Q8WTR7 871 aaKnown RBP16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 FBXL20Q96IG2 436 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 RILPQ96NA2 401 aa16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDLIM4-202ENST00000379018 GLOD5A6NK44 160 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 SMAD7O15105 426 aaKnown RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 PHGDHO43175 533 aaKnown RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 TRIM3O75382 744 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 LY6G6DO95868 133 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 C1QAP02745 245 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 S100BP04271 92 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 HEXAP06865 529 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 CTSSP25774 331 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 RPL21P46778 160 aaKnown RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 IGLV3-21P80748 117 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 EIPR1Q53HC9 387 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 NSUN5P2Q63ZY6 315 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 SULT1C3Q6IMI6 304 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 PM20D2Q8IYS1 436 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 DND1Q8IYX4 353 aaKnown RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 GNRHR2Q96P88 292 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 RBM24Q9BX46 236 aaKnown RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 DERL2Q9GZP9 239 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 TEX10Q9NXF1 929 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 PPP2R2CQ9Y2T4 447 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 JRKLQ9Y4A0 524 aa16.28■□□□□ 0.2
PDLIM4-202ENST00000379018 A0A1W2PPR1 153 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 WASHC1A8K0Z3 465 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 KIAA1324LA8MWY0 1029 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 TP53I11O14683 189 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 GNB5O14775 395 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 HRGP04196 525 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 CCDC166P0CW27 439 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 BMP7P18075 431 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 OPRM1P35372 400 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 CDK9P50750 372 aaKnown RBP16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 TNFRSF17Q02223 184 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 EBPQ15125 230 aaKnown RBP16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 RPS6KA2Q15349 733 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 OR4D1Q15615 310 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 NTRK2Q16620 822 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 WIPI1Q5MNZ9 446 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 Q5PR19 223 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 MED27Q6P2C8 311 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 PRIMA1Q86XR5 153 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 MYLK4Q86YV6 388 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 P3H2Q8IVL5 708 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 PRR22Q8IZ63 422 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 TAGAPQ8N103 731 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 C9orf106Q8NAJ2 232 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 RIT1Q92963 219 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 WDR34Q96EX3 536 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 OSBPL9Q96SU4 736 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 MDFIQ99750 246 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 UGT2B28Q9BY64 529 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 PRDM14Q9GZV8 571 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 GRPEL1Q9HAV7 217 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 BEX4Q9NWD9 120 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 TEX264Q9Y6I9 313 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 ARID1AO14497 2285 aa16.27■□□□□ 0.2
PDLIM4-202ENST00000379018 FBN3Q75N90 2809 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 H7C1Q1 480 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 ERN1O75460 977 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 TMIGD3P0DMS9 266 aaPredicted RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 EPORP19235 508 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 TLX1P31314 330 aaPredicted RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 SSTR4P31391 388 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 HNRNPH2P55795 449 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 ARL4CP56559 192 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 SORDQ00796 357 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 SRYQ05066 204 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 RCAN2Q14206 197 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 FASTKD3Q14CZ7 662 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 SF3B4Q15427 424 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 TMEM35AQ53FP2 167 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 KHDRBS2Q5VWX1 349 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 SHEQ5VZ18 495 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 HLA-DQA1Q5Y7H0 255 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 VASNQ6EMK4 673 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 OR4C11Q6IEV9 310 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 PLXDC2Q6UX71 529 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 YRDCQ86U90 279 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 GPR180Q86V85 440 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 PACS2Q86VP3 889 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms