RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 S100ZQ8WXG8 99 aa13.79□□□□□ -0.2
TCOF1-202ENST00000377797 A0A1B0GTL3 188 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 SLC30A4O14863 429 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 KLK8O60259 260 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 TMCC2O75069 709 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 RNF144AP50876 292 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-202ENST00000377797 KCTD21Q4G0X4 260 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 GHDCQ8N2G8 530 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 EID2BQ96D98 161 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 CD180Q99467 661 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 PCDHA9Q9Y5H5 950 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 A0A0J9YY10 115 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 POM121BA6NF01 834 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 IFI30P13284 250 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 BMP8BP34820 402 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 HYAL1Q12794 435 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 SLC5A12Q1EHB4 618 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 RGS21Q2M5E4 152 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 MZT2AQ6P582 158 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 HSDL2Q6YN16 418 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 BMP8AQ7Z5Y6 402 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 SPRED2Q7Z698 418 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 DENND6BQ8NEG7 585 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 CNIH3Q8TBE1 160 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 KLHL6Q8WZ60 621 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 GORASP2Q9H8Y8 452 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 TRNAU1APQ9NX07 287 aaKnown RBP13.78□□□□□ -0.2
TCOF1-202ENST00000377797 PRODH2Q9UF12 536 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 CXorf51AA0A1B0GTR3 108 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 ANTXRLA6NF34 631 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 IL12AP29459 219 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 MC3RP41968 323 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 TMEM44Q2T9K0 475 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF773Q6PK81 442 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 SLC36A4Q6YBV0 504 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 NUDT8Q8WV74 236 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF583Q96ND8 569 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 SERINC2Q96SA4 455 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 TAPBPLQ9BX59 468 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 FAM118AQ9NWS6 357 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 KNTC1P50748 2209 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 RCBTB2O95199 551 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
TCOF1-202ENST00000377797 SELENOWP63302 87 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 B4GALNT1Q00973 533 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 NPRL3Q12980 569 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 RPS26P11Q5JNZ5 115 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-202ENST00000377797 FGD2Q7Z6J4 655 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 TMEFF1Q8IYR6 380 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 HS3ST5Q8IZT8 346 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 OR6K6Q8NGW6 343 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 HDAC2Q92769 488 aaKnown RBP13.78□□□□□ -0.2
TCOF1-202ENST00000377797 PDXPQ96GD0 296 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 DEPDC7Q96QD5 511 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 RIMS3Q9UJD0 308 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 ERVK-11Q9UQG0 969 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 ENPP4Q9Y6X5 453 aa13.78□□□□□ -0.2
TCOF1-202ENST00000377797 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.2
TCOF1-202ENST00000377797 UGT8Q16880 541 aa13.77□□□□□ -0.2
TCOF1-202ENST00000377797 CXXC5Q7LFL8 322 aaKnown RBP13.77□□□□□ -0.2
TCOF1-202ENST00000377797 CLIP4Q8N3C7 705 aa13.77□□□□□ -0.2
TCOF1-202ENST00000377797 OR1E3Q8WZA6 343 aa13.77□□□□□ -0.2
TCOF1-202ENST00000377797 AGPAT4Q9NRZ5 378 aa13.77□□□□□ -0.2
TCOF1-202ENST00000377797 STARD5Q9NSY2 213 aa13.77□□□□□ -0.2
TCOF1-202ENST00000377797 DNAJC27Q9NZQ0 273 aa13.77□□□□□ -0.2
TCOF1-202ENST00000377797 H0Y8X5 98 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 AP1G1O43747 822 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 ABCB7O75027 752 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 CXCR1P25024 350 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 PCGF2P35227 344 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 INAVAQ3KP66 663 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 OAFQ86UD1 273 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 FAM217AQ8IXS0 508 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 OR8J2Q8NGG1 315 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 OR9A2Q8NGT5 310 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 SLC25A36Q96CQ1 311 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 SH3YL1Q96HL8 342 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 EXO5Q9H790 373 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 PRR23D1E9PI22 279 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 PRR23D2P0DMB1 279 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 MVKQ03426 396 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 GINS1Q14691 196 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 TMEM196Q5HYL7 178 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 OR5M3Q8NGP4 307 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 C9orf43Q8TAL5 461 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 JSRP1Q96MG2 331 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 RPP25Q9BUL9 199 aaKnown RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 LGR4Q9BXB1 951 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 RP1L1Q8IWN7 2480 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 TOR1BO14657 336 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 KHNYNO15037 678 aaKnown RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 AHRP35869 848 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 SLC6A12P48065 614 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 MXD1Q05195 221 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms