RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 PPM1HQ9ULR3 514 aa4.46□□□□□ -1.69
SCN1A-202ENST00000375405 ARHGAP31Q2M1Z3 1444 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MANSC4A6NHS7 340 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SERPINA6P08185 405 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MAPTP10636 758 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 NFYBP25208 207 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PKLRP30613 574 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 UGT8Q16880 541 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ARHGAP11BQ3KRB8 267 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CRB2Q5IJ48 1285 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 NKAPQ8N5F7 415 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ASCC1Q8N9N2 400 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 IL17RDQ8NFM7 739 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 OR7G2Q8NG99 324 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 OR8U1Q8NH10 309 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 STAG3L4Q8TBR4 150 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CELF1Q92879 486 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TRMT2BQ96GJ1 504 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MBOAT4Q96T53 435 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM43Q9BTV4 400 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 OSBPL7Q9BZF2 842 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ELOVL4Q9GZR5 314 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SIRT5Q9NXA8 310 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 C5orf52A6NGY3 159 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 METTL15A6NJ78 407 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 UBE2L6O14933 153 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 DCXO43602 365 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 DFNA5O60443 496 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 FGF19O95750 216 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MAS1P04201 325 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 DDCP20711 480 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SSTR1P30872 391 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF267Q14586 743 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PHYHD1Q5SRE7 291 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SDHAF4Q5VUM1 108 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ZCCHC23Q6ZST2 131 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 YRDCQ86U90 279 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF584Q8IVC4 421 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 FAM109AQ8N4B1 249 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 NLGN2Q8NFZ4 835 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 OR52E4Q8NGH9 312 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TCP10LQ8TDR4 215 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PAFAH2Q99487 392 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SMOQ99835 787 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PSD2Q9BQI7 771 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 RBM24Q9BX46 236 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MYOZ2Q9NPC6 264 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 BIN3Q9NQY0 253 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 LUZP4Q9P127 313 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PTBP2Q9UKA9 531 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PRPF19Q9UMS4 504 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 LSM5Q9Y4Y9 91 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 A2MP01023 1474 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CDRT15L2A8MXV6 281 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CYR61O00622 381 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SGPL1O95470 568 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SULT1A3P0DMM9 295 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SULT1A4P0DMN0 295 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 XRCC1P18887 633 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 HNRNPFP52597 415 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MPP1Q00013 466 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ACY1Q03154 408 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 EVX2Q03828 476 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 KLRB1Q12918 225 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 RPA4Q13156 261 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF829Q3KNS6 432 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SPDYCQ5MJ68 293 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 THEM4Q5T1C6 240 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 C9orf135Q5VTT2 229 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 LPCAT4Q643R3 524 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CHADLQ6NUI6 762 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SULF2Q8IWU5 870 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 NDRG1Q92597 394 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CORO2AQ92828 525 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 DNMBPQ6XZF7 1577 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ADGBQ8N7X0 1667 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 DENND4BO75064 1496 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 LRRC3CA6NJW4 275 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MEIS3P2A8K0S8 358 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 I3L521 148 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ADAM12O43184 909 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 USP2O75604 605 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 EYA4O95677 639 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CH25HO95992 272 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PNPP00491 289 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 GYPCP04921 128 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 RPLP2P05387 115 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CD36P16671 472 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 POLR2CP19387 275 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 HNF1AP20823 631 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SFTPDP35247 375 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 GP5P40197 560 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ECI1P42126 302 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SMAD3P84022 425 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ELP6Q0PNE2 266 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TROAPQ12815 778 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CDH17Q12864 832 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PMS2P3Q13401 168 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ADIPOQQ15848 244 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms