RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 ARMC10Q8N2F6 343 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 ZNF781Q8N8C0 355 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 THAP3Q8WTV1 239 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 RIT1Q92963 219 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 SORT1Q99523 831 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 ILKAPQ9H0C8 392 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 SLAMF7Q9NQ25 335 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 PSME2Q9UL46 239 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 RAP2CQ9Y3L5 183 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 DOCK10Q96BY6 2186 aa19.53■□□□□ 0.72
MAP1LC3A-202ENST00000374837 LSM1O15116 133 aaKnown RBP19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 DYRK3O43781 588 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 ERAL1O75616 437 aaKnown RBP19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 SASH3O75995 380 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 IGKV3-11P04433 115 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 PORP16435 677 aaPredicted RBP19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 FEN1P39748 380 aaKnown RBP19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 GSTM5P46439 218 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 TNFSF10P50591 281 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 ZNF763Q0D2J5 394 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 C2orf80Q0P641 193 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 BST1Q10588 318 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 ZNF267Q14586 743 aaPredicted RBP19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 HEPACAMQ14CZ8 416 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 TLR1Q15399 786 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 RFTN2Q52LD8 501 aaPredicted RBP19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 HSDL2Q6YN16 418 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 KLHL29Q96CT2 875 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 C3orf30Q96M34 536 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 CXorf21Q9HAI6 301 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 ABI3Q9P2A4 366 aa19.52■□□□□ 0.72
MAP1LC3A-202ENST00000374837 BSNQ9UPA5 3926 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 OR5H15A6NDH6 313 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TMEM200CA6NKL6 621 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TTLL8A6PVC2 850 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 GABRR3A8MPY1 467 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 SKAP2O75563 359 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 WISP1O95388 367 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CSNK2A2P19784 350 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CD96P40200 585 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 MLLT10P55197 1068 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ERVK-8P63133 956 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TLE1Q04724 770 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TUBA3CQ13748 450 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ZNF169Q14929 603 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 SPRED3Q2MJR0 410 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 XKR7Q5GH72 579 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 FAM71E1Q6IPT2 247 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 FAM180BQ6P0A1 224 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TUBA3EQ6PEY2 450 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CDC26Q8NHZ8 85 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CNRIP1Q96F85 164 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 FBXL20Q96IG2 436 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ART5Q96L15 291 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 FCRL1Q96LA6 429 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ZNF681Q96N22 645 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CNPPD1Q9BV87 410 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 LIN28AQ9H9Z2 209 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 MYNNQ9NPC7 610 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 COPS7AQ9UBW8 275 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 GIMAP2Q9UG22 337 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 UTS2RQ9UKP6 389 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ERVK-19Q9WJR5 959 aa19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 WBP11Q9Y2W2 641 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3A-202ENST00000374837 SNUPNO95149 360 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TACR1P25103 407 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 RPL14P50914 215 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 RPL38P63173 70 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 RNF4P78317 190 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 DUSP2Q05923 314 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 GALNTL6Q49A17 601 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ZNF468Q5VIY5 522 aaPredicted RBP19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 C16orf47Q6ZP98 133 aaPredicted RBP19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 GOLGA6L1Q8N7Z2 621 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 OR8K3Q8NH51 312 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 EGLN2Q96KS0 407 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CCT7Q99832 543 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 UTP23Q9BRU9 249 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ANKRD10Q9NXR5 420 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 HAO1Q9UJM8 370 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 EXO1Q9UQ84 846 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 PCDHGA10Q9Y5H3 936 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ZNF780BQ9Y6R6 833 aa19.5■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TRAV17A0A0B4J275 112 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ATP6AP2A0A1C7CYW4 349 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 PEX11AO75192 247 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 ATP6AP2O75787 350 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 CT62P0C5K7 136 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 DDCP20711 480 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 NT5EP21589 574 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 PRSS53Q2L4Q9 553 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 GALNT12Q8IXK2 581 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 EXOSC8Q96B26 276 aaKnown RBP19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 PPP3R2Q96LZ3 170 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 PNPOQ9NVS9 261 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 EHD3Q9NZN3 535 aa19.49■□□□□ 0.71
MAP1LC3A-202ENST00000374837 TMED5Q9Y3A6 229 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms