RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CAPRIN1Q14444 709 aaKnown RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 GBX1Q14549 363 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 NCF4Q15080 339 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 CYBRD1Q53TN4 286 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 TCTE1Q5JU00 501 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 PAGE3Q5JUK9 113 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 YOD1Q5VVQ6 348 aaPredicted RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 RHBDD2Q6NTF9 364 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ERICH5Q6P6B1 374 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 DLEU7Q6UYE1 221 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 RPS27LQ71UM5 84 aaKnown RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 TRIM73Q86UV7 250 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 IFNEQ86WN2 208 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 RAB43Q86YS6 212 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 TMEM132CQ8N3T6 1108 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 OR2T12Q8NG77 320 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 FLVCR1-AS1Q8TAF5 88 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ISOC1Q96CN7 298 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ABHD17AQ96GS6 310 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ITCHQ96J02 903 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 HIST1H2AHQ96KK5 128 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 CCDC138Q96M89 665 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 IP6K3Q96PC2 410 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 HIST1H2AJQ99878 128 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 H2AFJQ9BTM1 129 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 NDC1Q9BTX1 674 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 MENTQ9BUN1 341 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 RPF2Q9H7B2 306 aaKnown RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 IPPKQ9H8X2 491 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 FAM60AQ9NP50 221 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 NDOR1Q9UHB4 597 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 GPN3Q9UHW5 284 aaPredicted RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 SNX6Q9UNH7 406 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 B3GNT3Q9Y2A9 372 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 PCDHGA11Q9Y5H2 935 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 KCNMB2Q9Y691 235 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 RELNP78509 3460 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CLEC18AA5D8T8 446 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 DLGAP1O14490 977 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 EI24O14681 340 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 LSM1O15116 133 aaKnown RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 IGHEP01854 428 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 C8GP07360 202 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CCDC159P0C7I6 412 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 MPC1LP0DKB6 136 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 MAGP20916 626 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 PPIBP23284 216 aaKnown RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 PRPH2P23942 346 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CMPK1P30085 196 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 RYKP34925 604 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 GGT5P36269 586 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 BDKRB1P46663 353 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 TRPC1P48995 793 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CXCR4P61073 352 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 ARHGAP19Q14CB8 494 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 DEFB110Q30KQ9 67 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 GGTA1PQ4G0N0 100 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 RUNDC3AQ59EK9 446 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 PRAMEF17Q5VTA0 474 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 FAM199XQ6PEV8 388 aaPredicted RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CLEC18BQ6UXF7 455 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 GOLGA7Q7Z5G4 137 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 DNAJC22Q8N4W6 341 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CDYL2Q8N8U2 506 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 SNX31Q8N9S9 440 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 LMNTD1Q8N9Z9 388 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 TTC29Q8NA56 475 aaPredicted RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 LINC01555Q8NAE3 123 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 MINDY2Q8NBR6 621 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 SLC38A9Q8NBW4 561 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CLEC18CQ8NCF0 446 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 OR4F6Q8NGB9 312 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 OR9A1PQ8NGU1 263 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 TRUB1Q8WWH5 349 aaKnown RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 SLC13A3Q8WWT9 602 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 S100ZQ8WXG8 99 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 C12orf43Q96C57 262 aaKnown RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 NSUN5Q96P11 429 aaKnown RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 NRTNQ99748 197 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 EGFL8Q99944 293 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 THUMPD3Q9BV44 507 aaKnown RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 EPS8L2Q9H6S3 715 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 C1orf109Q9NX04 203 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 GALNT8Q9NY28 637 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 ANKMY1Q9P2S6 941 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 ADGRE2Q9UHX3 823 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 RPS6KA6Q9UK32 745 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 BAG5Q9UL15 447 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 TCFL5Q9UL49 500 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 SAMD4AQ9UPU9 718 aaKnown RBP9.82□□□□□ -0.84
COL5A1-202ENST00000371820 CORO2BQ9UQ03 480 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 TP53TG5Q9Y2B4 290 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 MED16Q9Y2X0 877 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 TPRKBQ9Y3C4 175 aa9.82□□□□□ -0.84
COL5A1-202ENST00000371820 A0A096LPI6 279 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 FAM220BPB1ANY3 271 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 PPP6CO00743 305 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SLC16A6O15403 523 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SRPX2O60687 465 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 UGDHO60701 494 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms