RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 LRRC75A-AS1Q8N1F1 130 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 SIMC1Q8NDZ2 872 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 GABPB2Q8TAK5 448 aaPredicted RBP14.06□□□□□ -0.16
SSR4-204ENST00000370087 SLC44A1Q8WWI5 657 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 GNRHR2Q96P88 292 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 KCNC2Q96PR1 638 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 ERVK-6Q9BXR3 956 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 MS4A8Q9BY19 250 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 LZTFL1Q9NQ48 299 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 ERVK-19Q9WJR5 959 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 PPP2R2CQ9Y2T4 447 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 C15orf41Q9Y2V0 281 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 TESMINQ9Y4I5 508 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 CHD3Q12873 2000 aaKnown RBP14.06□□□□□ -0.16
SSR4-204ENST00000370087 HIVEP2P31629 2446 aa14.06□□□□□ -0.16
SSR4-204ENST00000370087 HEATR5AQ86XA9 2040 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 WASHC1A8K0Z3 465 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 SAP18O00422 153 aaKnown RBP14.05□□□□□ -0.16
SSR4-204ENST00000370087 COX7A2P14406 83 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 HIST1H1TP22492 207 aaPredicted RBP14.05□□□□□ -0.16
SSR4-204ENST00000370087 CPN2P22792 545 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 NAGLUP54802 743 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 TBL3Q12788 808 aaKnown RBP14.05□□□□□ -0.16
SSR4-204ENST00000370087 NHSL2Q5HYW2 709 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 C18orf63Q68DL7 685 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 SYDE1Q6ZW31 735 aaPredicted RBP14.05□□□□□ -0.16
SSR4-204ENST00000370087 PPIL6Q8IXY8 311 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 RNF175Q8N4F7 328 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 BBOF1Q8ND07 529 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 TRIM58Q8NG06 486 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 DIO2Q92813 273 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 PERPQ96FX8 193 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 CFAP36Q96G28 342 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 RILPQ96NA2 401 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 PIP5K1AQ99755 562 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 PPANQ9NQ55 473 aaKnown RBP14.05□□□□□ -0.16
SSR4-204ENST00000370087 CORO1CQ9ULV4 474 aaPredicted RBP14.05□□□□□ -0.16
SSR4-204ENST00000370087 WIF1Q9Y5W5 379 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 NPFFR2Q9Y5X5 522 aa14.05□□□□□ -0.16
SSR4-204ENST00000370087 DEFB108AA8MXU0 73 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 ERN1O75460 977 aaKnown RBP14.04□□□□□ -0.16
SSR4-204ENST00000370087 SCELO95171 688 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 TTC4O95801 387 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 SERPINB3P29508 390 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 HSPA7P48741 367 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 SLC37A1P57057 533 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 TAS2R39P59534 338 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 CYP1B1Q16678 543 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 CCDC137Q6PK04 289 aaKnown RBP14.04□□□□□ -0.16
SSR4-204ENST00000370087 FRA10AC1Q70Z53 315 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 DND1Q8IYX4 353 aaKnown RBP14.04□□□□□ -0.16
SSR4-204ENST00000370087 ZNF441Q8N8Z8 693 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 PPP1R14CQ8TAE6 165 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 ZNF473Q8WTR7 871 aaKnown RBP14.04□□□□□ -0.16
SSR4-204ENST00000370087 ISL2Q96A47 359 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 WDR34Q96EX3 536 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 TUBA1CQ9BQE3 449 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 PIGQQ9BRB3 760 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 PITHD1Q9GZP4 211 aaPredicted RBP14.04□□□□□ -0.16
SSR4-204ENST00000370087 EHD1Q9H4M9 534 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 CALHM2Q9HA72 323 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 DNAJC11Q9NVH1 559 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 GPRC5BQ9NZH0 403 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 IKBKGQ9Y6K9 419 aa14.04□□□□□ -0.16
SSR4-204ENST00000370087 DSCAMO60469 2012 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 A0A1W2PS29 197 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 ANKRD33BA6NCL7 494 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 ALOX15P16050 662 aaPredicted RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 CPA2P48052 419 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 HNRNPH2P55795 449 aaKnown RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 PPP2R2BQ00005 443 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 PLIN5Q00G26 463 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 KRTAP1-1Q07627 177 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 TGM3Q08188 693 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 ZNF267Q14586 743 aaPredicted RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 TGFBIQ15582 683 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 RNF111Q6ZNA4 994 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 CAPN12Q6ZSI9 719 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 SLC29A4Q7RTT9 530 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 ADAMTSL2Q86TH1 951 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 YRDCQ86U90 279 aaKnown RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 GCNT2Q8N0V5 402 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 SPATA6LQ8N4H0 392 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 SNX31Q8N9S9 440 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 SPPL2AQ8TCT8 520 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 ANKRD7Q92527 254 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 UCN3Q969E3 161 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 ABTB1Q969K4 478 aaPredicted RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 NTNG2Q96CW9 530 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 PTCD3Q96EY7 689 aaKnown RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 TBCDQ9BTW9 1192 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 G6PC3Q9BUM1 346 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 BDH2Q9BUT1 245 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 ANGPTL4Q9BY76 406 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 RPF2Q9H7B2 306 aaKnown RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 UBTD1Q9HAC8 227 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 TEX10Q9NXF1 929 aaPredicted RBP14.03□□□□□ -0.16
SSR4-204ENST00000370087 CTNNAL1Q9UBT7 734 aa14.03□□□□□ -0.16
SSR4-204ENST00000370087 FAM95CA0A1B0GW59 222 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms