RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PTPMT1Q8WUK0 201 aaPredicted RBP12.85□□□□□ -0.35
SSR4-202ENST00000370085 NCLNQ969V3 563 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 EXOSC8Q96B26 276 aaKnown RBP12.85□□□□□ -0.35
SSR4-202ENST00000370085 ZNF764Q96H86 408 aaPredicted RBP12.85□□□□□ -0.35
SSR4-202ENST00000370085 FBXL20Q96IG2 436 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 TSSK3Q96PN8 268 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 LMF1Q96S06 567 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 OR8D2Q9GZM6 311 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 AKTIPQ9H8T0 292 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 SLC35C2Q9NQQ7 365 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 ATAD3AQ9NVI7 634 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 ASIC5Q9NY37 505 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 PTGFRNQ9P2B2 879 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 CES1P1Q9UKY3 287 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 PPIEQ9UNP9 301 aaKnown RBP12.85□□□□□ -0.35
SSR4-202ENST00000370085 CLDN16Q9Y5I7 305 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 CNTRLQ7Z7A1 2325 aa12.85□□□□□ -0.35
SSR4-202ENST00000370085 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 MYOCOSA0A1B0GUC4 107 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 FCHO1O14526 889 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 SLITRK5O94991 958 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 ATP1B1P05026 303 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 PRPS1L1P21108 318 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 NT5EP21589 574 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 FEN1P39748 380 aaKnown RBP12.84□□□□□ -0.35
SSR4-202ENST00000370085 CASRP41180 1078 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 LY6DQ14210 128 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 ZNF267Q14586 743 aaPredicted RBP12.84□□□□□ -0.35
SSR4-202ENST00000370085 MEP1AQ16819 746 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 NXNQ6DKJ4 435 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 RGS9BPQ6ZS82 235 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 ACAD11Q709F0 780 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 SPATA19Q7Z5L4 167 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 TICAM1Q8IUC6 712 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 LGI4Q8N135 537 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 LIX1Q8N485 282 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 SIRT6Q8N6T7 355 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 EXD3Q8N9H8 876 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 OR1N1Q8NGS0 311 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 OR8K3Q8NH51 312 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 ZFP28Q8NHY6 868 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.84□□□□□ -0.35
SSR4-202ENST00000370085 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 PPWD1Q96BP3 646 aaKnown RBP12.84□□□□□ -0.35
SSR4-202ENST00000370085 PPCDCQ96CD2 204 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 SENP5Q96HI0 755 aaPredicted RBP12.84□□□□□ -0.35
SSR4-202ENST00000370085 C1orf50Q9BV19 199 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 CNPPD1Q9BV87 410 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 NUDT9Q9BW91 350 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 REEP4Q9H6H4 257 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 ZNF552Q9H707 407 aaPredicted RBP12.84□□□□□ -0.35
SSR4-202ENST00000370085 RYDENQ9NUL5 291 aaKnown RBP12.84□□□□□ -0.35
SSR4-202ENST00000370085 TAS2R7Q9NYW3 318 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 HEY2Q9UBP5 337 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 CFL2Q9Y281 166 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 TP53TG5Q9Y2B4 290 aa12.84□□□□□ -0.35
SSR4-202ENST00000370085 PCSK5Q92824 1860 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 MASP2O00187 686 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 BCAS2O75934 225 aaPredicted RBP12.83□□□□□ -0.36
SSR4-202ENST00000370085 JUNP05412 331 aaKnown RBP12.83□□□□□ -0.36
SSR4-202ENST00000370085 MFAP5Q13361 173 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 RPS6KA2Q15349 733 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 OGFOD2Q6N063 350 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 H3F3CQ6NXT2 135 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 RNF111Q6ZNA4 994 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 FAM47EQ6ZV65 393 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 SLC29A4Q7RTT9 530 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 RPS19BP1Q86WX3 136 aaKnown RBP12.83□□□□□ -0.36
SSR4-202ENST00000370085 MMP21Q8N119 569 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 VWA5B2Q8N398 1253 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 HORMAD2Q8N7B1 307 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 TEX19Q8NA77 164 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 APCDD1LQ8NCL9 501 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 NFAM1Q8NET5 270 aaPredicted RBP12.83□□□□□ -0.36
SSR4-202ENST00000370085 OR7G1Q8NGA0 311 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 CEP70Q8NHQ1 597 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 SUN3Q8TAQ9 357 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 GFM2Q969S9 779 aaKnown RBP12.83□□□□□ -0.36
SSR4-202ENST00000370085 ERP27Q96DN0 273 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 SIKE1Q9BRV8 207 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 BRINP2Q9C0B6 783 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 CXorf21Q9HAI6 301 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 ZNF71Q9NQZ8 489 aaPredicted RBP12.83□□□□□ -0.36
SSR4-202ENST00000370085 STMN3Q9NZ72 180 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 SH3BP4Q9P0V3 963 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 BAIAP2L1Q9UHR4 511 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 USH1CQ9Y6N9 552 aa12.83□□□□□ -0.36
SSR4-202ENST00000370085 ATRXP46100 2492 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 WASHC1A8K0Z3 465 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 TCP11X1B4DZS4 312 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 SDHDO14521 159 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 POLR3GO15318 223 aaPredicted RBP12.82□□□□□ -0.36
SSR4-202ENST00000370085 PDPK1O15530 556 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 AKAP10O43572 662 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 TBX19O60806 448 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 DIAPH2O60879 1101 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 LRATO95237 230 aa12.82□□□□□ -0.36
SSR4-202ENST00000370085 DDAH2O95865 285 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms