RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 RNF31Q96EP0 1072 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SEMA3CQ99985 751 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CDADC1Q9BWV3 514 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SYNDIG1Q9H7V2 258 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 IL26Q9NPH9 171 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SLC35C2Q9NQQ7 365 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ZC4H2Q9NQZ6 224 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 NLE1Q9NVX2 485 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF358Q9NW07 568 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 SLC23A2Q9UGH3 650 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CA5BQ9Y2D0 317 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 RAI1Q7Z5J4 1906 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 A0A096LPK6 155 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 A8MXK9 166 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 UPK1AO00322 258 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 DSCR3O14972 297 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 EIF1BO60739 113 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CPNE3O75131 537 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CYP7B1O75881 506 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 INMTO95050 263 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 HSPA4LO95757 839 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 FTH1P19P0C7X4 201 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ITGALP20701 1170 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ELK4P28324 431 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PEBP1P30086 187 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 EIF1P41567 113 aaKnown RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 STARP49675 285 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 EFNA3P52797 238 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 IL1RL1Q01638 556 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 FAM76BQ5HYJ3 339 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 FAM46CQ5VWP2 391 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 TMEM236Q5W0B7 351 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 LRFN4Q6PJG9 635 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 WDR74Q6RFH5 385 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PAGE2Q7Z2X7 111 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ZBTB46Q86UZ6 589 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 TRAM1L1Q8N609 369 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 CANT1Q8WVQ1 401 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 LGALS12Q96DT0 336 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 NPAS1Q99742 590 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 IL22Q9GZX6 179 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 ZCCHC4Q9H5U6 513 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 C3orf14Q9HBI5 128 aa6.52□□□□□ -1.37
CSDE1-204ENST00000369530 DNMT3AQ9Y6K1 912 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-204ENST00000369530 PCNX2A6NKB5 2137 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 ZCWPW2A0A1B0GU75 182 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 MFSD2BA6NFX1 497 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 STX16-NPEPL1H3BU86 382 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 GRID2O43424 1007 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 B4GAT1O43505 415 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 CER1O95813 267 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 HLA-DQB1P01920 261 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 ALPLP05186 524 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SMIM6P0DI80 62 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 MLNP12872 115 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 YAP1P46937 504 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 HK3P52790 923 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 EPHA4P54764 986 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 CDH13P55290 713 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 EMX1Q04741 257 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 FOXM1Q08050 763 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 LGALS3BPQ08380 585 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 HYAL2Q12891 473 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SPANXN3Q5MJ09 141 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 LDB1Q86U70 411 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 DHFR2Q86XF0 187 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 PROSER1Q86XN7 944 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 RIMKLAQ8IXN7 391 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SLC35F3Q8IY50 421 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 GHDCQ8N2G8 530 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 RBPMSQ93062 196 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 TMEM68Q96MH6 324 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 MUS81Q96NY9 551 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 FYTTD1Q96QD9 318 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 OR52A5Q9H2C5 316 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 GAREM1Q9H706 876 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 KAT8Q9H7Z6 458 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 LYARQ9NX58 379 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SUSD2Q9UGT4 822 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 OAZ3Q9UMX2 235 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 KRBOX1C9JBD0 128 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 EI24O14681 340 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 PSMD3O43242 534 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 RECKO95980 971 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 MRPL19P49406 292 aaKnown RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 RAB25P57735 213 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SLAMF1Q13291 335 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 INPP5AQ14642 412 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 TTC23Q5W5X9 447 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 TMEM135Q86UB9 458 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 DENND6AQ8IWF6 608 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 DDIASQ8IXT1 998 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 VWA5B2Q8N398 1253 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 GDPD1Q8N9F7 314 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 MAGEE2Q8TD90 523 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-204ENST00000369530 NODALQ96S42 347 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SARGQ9BW04 601 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 HDHD5Q9BXW7 423 aa6.51□□□□□ -1.37
CSDE1-204ENST00000369530 SARS2Q9NP81 518 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms