RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 LTB4RQ15722 352 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 BEND6Q5SZJ8 279 aaPredicted RBP13.62□□□□□ -0.23
SF3B5-201ENST00000367569 C10orf62Q5T681 223 aaPredicted RBP13.62□□□□□ -0.23
SF3B5-201ENST00000367569 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 OR2T11Q8NH01 316 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 MGARPQ8TDB4 240 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 TANKQ92844 425 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 TM4SF18Q96CE8 201 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 KLHL29Q96CT2 875 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 TAAR6Q96RI8 345 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 GAL3ST4Q96RP7 486 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 UTP23Q9BRU9 249 aaKnown RBP13.62□□□□□ -0.23
SF3B5-201ENST00000367569 TSPAN10Q9H1Z9 355 aaPredicted RBP13.62□□□□□ -0.23
SF3B5-201ENST00000367569 ZNF395Q9H8N7 513 aaPredicted RBP13.62□□□□□ -0.23
SF3B5-201ENST00000367569 KCNK9Q9NPC2 374 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 ADAM29Q9UKF5 820 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 OSGIN2Q9Y236 505 aa13.62□□□□□ -0.23
SF3B5-201ENST00000367569 TRAV17A0A0B4J275 112 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 AZIN1O14977 448 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 CTIFO43310 598 aaKnown RBP13.61□□□□□ -0.23
SF3B5-201ENST00000367569 PRAMEF2O60811 474 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 ITGA10O75578 1167 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 OR2J2O76002 312 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 BPGMP07738 259 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 LINC00032P0C843 101 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 HSD3B1P14060 373 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 NT5EP21589 574 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 HSD3B2P26439 372 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 PIK3R1P27986 724 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 FEN1P39748 380 aaKnown RBP13.61□□□□□ -0.23
SF3B5-201ENST00000367569 ETV4P43268 484 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 SERPINB4P48594 390 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 HK2P52789 917 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 ARFIP1P53367 373 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 MPP2Q14168 576 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 ARL13AQ5H913 290 aaPredicted RBP13.61□□□□□ -0.23
SF3B5-201ENST00000367569 ZNF766Q5HY98 468 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 SH2D4BQ5SQS7 431 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 KANK2Q63ZY3 851 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 RPUSD3Q6P087 351 aaKnown RBP13.61□□□□□ -0.23
SF3B5-201ENST00000367569 C9orf40Q8IXQ3 194 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 DDIASQ8IXT1 998 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 MDS2Q8NDY4 140 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 PPP1R14CQ8TAE6 165 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 ZNF721Q8TF20 911 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 CHTF18Q8WVB6 975 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 HAS2Q92819 552 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 DAZLQ92904 295 aaKnown RBP13.61□□□□□ -0.23
SF3B5-201ENST00000367569 EXOSC8Q96B26 276 aaKnown RBP13.61□□□□□ -0.23
SF3B5-201ENST00000367569 SLX1AQ9BQ83 275 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 TUBB1Q9H4B7 451 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 PFDN4Q9NQP4 134 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 NMRK1Q9NWW6 199 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 COPS7AQ9UBW8 275 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 MCM8Q9UJA3 840 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 DLGAP4Q9Y2H0 992 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 PCDHA9Q9Y5H5 950 aa13.61□□□□□ -0.23
SF3B5-201ENST00000367569 MYO7BQ6PIF6 2116 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 LRBAP50851 2863 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 TMEM200CA6NKL6 621 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 G3V3Y1 287 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 PIP5K1BO14986 540 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 ITM2AO43736 263 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 ZNF354AO60765 605 aaPredicted RBP13.6□□□□□ -0.23
SF3B5-201ENST00000367569 CLPSP04118 112 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 TUBBP07437 444 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 ANXA4P09525 319 aaPredicted RBP13.6□□□□□ -0.23
SF3B5-201ENST00000367569 UROSP10746 265 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 RFC3P40938 356 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 RPL38P63173 70 aaKnown RBP13.6□□□□□ -0.23
SF3B5-201ENST00000367569 RNF4P78317 190 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 CHI3L2Q15782 390 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 GALNTL6Q49A17 601 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 SPIN4Q56A73 249 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 SLC48A1Q6P1K1 146 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 FAM180AQ6UWF9 173 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 LRIG3Q6UXM1 1119 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 HSDL2Q6YN16 418 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 ZNF227Q86WZ6 799 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 ST13P4Q8IZP2 240 aaPredicted RBP13.6□□□□□ -0.23
SF3B5-201ENST00000367569 GBP7Q8N8V2 638 aaPredicted RBP13.6□□□□□ -0.23
SF3B5-201ENST00000367569 MORN4Q8NDC4 146 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 SIMC1Q8NDZ2 872 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 ADCY4Q8NFM4 1077 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 OR4K14Q8NGD5 310 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 CLHC1Q8NHS4 586 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 SUN3Q8TAQ9 357 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 C16orf78Q8WTQ4 265 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 TWIST2Q8WVJ9 160 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 PPP1R36Q96LQ0 422 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 PAIP2Q9BPZ3 127 aaKnown RBP13.6□□□□□ -0.23
SF3B5-201ENST00000367569 RNF32Q9H0A6 362 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 SENP1Q9P0U3 644 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 LRFN1Q9P244 771 aa13.6□□□□□ -0.23
SF3B5-201ENST00000367569 PPIEQ9UNP9 301 aaKnown RBP13.6□□□□□ -0.23
SF3B5-201ENST00000367569 C1orf226A1L170 272 aa13.59□□□□□ -0.23
SF3B5-201ENST00000367569 FCHO1O14526 889 aa13.59□□□□□ -0.23
SF3B5-201ENST00000367569 NPHS1O60500 1241 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms