RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 NPIPA2E9PIF3 369 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 NPIPA3F8WFD2 350 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 G3V3Y1 287 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 HRKO00198 91 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 TMPRSS11DO60235 418 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 WDR1O75083 606 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 EEDO75530 441 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 TOXO94900 526 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 CLDN9O95484 217 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 FBXO45P0C2W1 286 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 FAM58BPP0C7Q3 252 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 SLC35E2P0CK97 266 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 NR2F6P10588 404 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 COL6A2P12110 1019 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 ACVR2AP27037 513 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 MAGEA5P43359 124 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 DNASE1L1P49184 302 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 SERPINB9P50453 376 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 NUP107P57740 925 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 HERVK_113P63132 956 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 ERVK-8P63133 956 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 SLC7A5Q01650 507 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 SLC10A1Q14973 349 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 EBPQ15125 230 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 NTRK2Q16620 822 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 CPSF6Q16630 551 aaKnown RBP eCLIP9.59□□□□□ -0.87
PARP1-201ENST00000366790 GGTA1PQ4G0N0 100 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 OR52E8Q6IFG1 317 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 CYP20A1Q6UW02 462 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 MEX3BQ6ZN04 569 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 RNF111Q6ZNA4 994 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 SLC29A4Q7RTT9 530 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 PLD6Q8N2A8 252 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 LRRC25Q8N386 305 aaPredicted RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 C17orf53Q8N3J3 647 aaPredicted RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 FBXW8Q8N3Y1 598 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 RPRMLQ8N4K4 120 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 ZNF441Q8N8Z8 693 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 CHTF18Q8WVB6 975 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 TP53INP1Q96A56 240 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 PPWD1Q96BP3 646 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 SERPINI1Q99574 410 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 ERVK-6Q9BXR3 956 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 WWTR1Q9GZV5 400 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 ZNF703Q9H7S9 590 aaPredicted RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 PROK2Q9HC23 129 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 MCCC2Q9HCC0 563 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 ACKR4Q9NPB9 350 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 NPDC1Q9NQX5 325 aaPredicted RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 PNPLA3Q9NST1 481 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 CPSF2Q9P2I0 782 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 MTRF1LQ9UGC7 380 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 ADAM29Q9UKF5 820 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 ERVK-19Q9WJR5 959 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 RNF11Q9Y3C5 154 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 LIPGQ9Y5X9 500 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 IKBKGQ9Y6K9 419 aa9.59□□□□□ -0.87
PARP1-201ENST00000366790 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.59□□□□□ -0.87
PARP1-201ENST00000366790 CAPN14A8MX76 684 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 OR7A17O14581 309 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 OR10H2O60403 315 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 PRKRAO75569 313 aaKnown RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 SIX3O95343 332 aaPredicted RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 AIFM1O95831 613 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 CLPSP04118 112 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 POU3F2P20265 443 aaPredicted RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 CNTFP26441 200 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 MSX1P28360 303 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 SERPINB3P29508 390 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 MAN2A2P49641 1150 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 TLE4Q04727 773 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 PMPCAQ10713 525 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 TRAF3Q13114 568 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 UAP1Q16222 522 aaPredicted RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 WHAMMP3Q1A5X7 153 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 TSNAXIP1Q2TAA8 658 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 B3GNT6Q6ZMB0 384 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 TAOK1Q7L7X3 1001 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 DMRTC2Q8IXT2 367 aaPredicted RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 MMGT1Q8N4V1 131 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 PTGR2Q8N8N7 351 aaPredicted RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 MYRIPQ8NFW9 859 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 OR5M3Q8NGP4 307 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 RIT1Q92963 219 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 SARAFQ96BY9 339 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 MRRFQ96E11 262 aaKnown RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 SECISBP2Q96T21 854 aaKnown RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 TTYH2Q9BSA4 534 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 VPS11Q9H270 941 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 CDC42EP4Q9H3Q1 356 aaKnown RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 NOL11Q9H8H0 719 aaKnown RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 CXorf21Q9HAI6 301 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 SLC24A3Q9HC58 644 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 ZFP64Q9NPA5 681 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 KCNJ16Q9NPI9 418 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 SEMA4BQ9NPR2 832 aaPredicted RBP9.58□□□□□ -0.88
PARP1-201ENST00000366790 AHSPQ9NZD4 102 aa9.58□□□□□ -0.88
PARP1-201ENST00000366790 ZNF180Q9UJW8 692 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms