RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 BMP1P13497 986 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 CASP9P55211 416 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 KCTD12Q96CX2 325 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 Q9N2J8 555 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 MYNNQ9NPC7 610 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ADH1BP00325 375 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 EDN1P05305 212 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 LCKP06239 509 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ATXN1LP0C7T5 689 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 NDUFV2P19404 249 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 CMTM8Q8IZV2 173 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 YIPF7Q8N8F6 280 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ADAMTS19Q8TE59 1207 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 RTTNQ86VV8 2226 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 CSF2P04141 144 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 EDNRAP25101 427 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 PRAMEF17Q5VTA0 474 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 TRIM46Q7Z4K8 759 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 NOXA1Q86UR1 476 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 UBQLNLQ8IYU4 475 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 C2orf73Q8N5S3 287 aaPredicted RBP11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 ASIC5Q9NY37 505 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 ANKRD36A6QL64 1941 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 A0A1W2PQL4 384 aaPredicted RBP11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 MTX2O75431 263 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 HTR1AP08908 422 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 SDC1P18827 310 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 FOXA1P55317 472 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 SCRN3Q0VDG4 424 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 GPR68Q15743 365 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 TSPAN33Q86UF1 283 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 TIGD4Q8IY51 512 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 ELMOD2Q8IZ81 293 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 C1QTNF3Q9BXJ4 246 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR51I1Q9H343 314 aa11.27□□□□□ -0.6
CDC42BPA-202ENST00000366764 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC3A1Q07837 685 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 CCL14Q16627 93 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 LRRC73Q5JTD7 316 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 DNAJC22Q8N4W6 341 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 OSER1Q9NX31 292 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 C1orf226A1L170 272 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 GABARAPO95166 117 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 KAT7O95251 611 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 GCGRP47871 477 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 CNKSR3Q6P9H4 555 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 SCD5Q86SK9 330 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 NRROSQ86YC3 692 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 PIAS4Q8N2W9 510 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 DNASE1P24855 282 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 RPL6Q02878 288 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 PAQR7Q86WK9 346 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 JPH3Q8WXH2 748 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 PTPN18Q99952 460 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 C11orf84Q9BUA3 381 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF717Q9BY31 904 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 PELI2Q9HAT8 420 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 ERVK13-1Q9NX77 482 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 DNAJB6O75190 326 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 CTU1Q7Z7A3 348 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 WDR48Q8TAF3 677 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 IGSF21Q96ID5 467 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 CNN2Q99439 309 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRMT61BQ9BVS5 477 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 RNF121Q9H920 327 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 SCN3AQ9NY46 2000 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 J3QLW9 94 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 RLN2P04090 185 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF19P17023 458 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 KAT2AQ92830 837 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 G6PC3Q9BUM1 346 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 SCN2AQ99250 2005 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 PIGBOS1A0A0B4J2F0 54 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 Q6ZVL8 140 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 UBE2Q1Q7Z7E8 422 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 B3GNT8Q7Z7M8 397 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM129CQ86XR2 697 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
CDC42BPA-202ENST00000366764 A0A1W2PRU2 124 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 EIF1AYO14602 144 aaKnown RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 SHMT2P34897 504 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 EIF1AXP47813 144 aaKnown RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 MCCD1P59942 119 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF613Q6PF04 617 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR4K5Q8NGD3 323 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR4K14Q8NGD5 310 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRPV4Q9HBA0 871 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 FBXO8Q9NRD0 319 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 GLS2Q9UI32 602 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 SPO11Q9Y5K1 396 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 TMEM150CB9EJG8 249 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 E2F3O00716 465 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 B4GAT1O43505 415 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 LMLNQ96KR4 655 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 C5orf34Q96MH7 638 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 TFPIP10646 304 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 CNR2P34972 360 aa11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 SF3A2Q15428 464 aaKnown RBP11.26□□□□□ -0.61
CDC42BPA-202ENST00000366764 GTF2IRD2BQ6EKJ0 949 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms