RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 TMEM35AQ53FP2 167 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 SPIN4Q56A73 249 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 C6orf136Q5SQH8 315 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 B3GNTL1Q67FW5 361 aaPredicted RBP7.66□□□□□ -1.18
MRPL55-211ENST00000366738 ACSM2BQ68CK6 577 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 NXNQ6DKJ4 435 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 OR4C11Q6IEV9 310 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 GFRALQ6UXV0 394 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 LINC00696Q6ZRV3 163 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 CHSY3Q70JA7 882 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 ABHD13Q7L211 337 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 SPATA21Q7Z572 469 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 NUDT13Q86X67 352 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 PRSS58Q8IYP2 241 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 CA13Q8N1Q1 262 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 BCORP1Q8N888 145 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 FNDC5Q8NAU1 212 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 CLHC1Q8NHS4 586 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 STT3BQ8TCJ2 826 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 UCN3Q969E3 161 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 RGMAQ96B86 450 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 NACC2Q96BF6 587 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 KCNC2Q96PR1 638 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 TAAR6Q96RI8 345 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 CSF3RQ99062 836 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 NSRP1Q9H0G5 558 aaKnown RBP7.66□□□□□ -1.18
MRPL55-211ENST00000366738 ZNF160Q9HCG1 818 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 TCF7L2Q9NQB0 619 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 RIC8BQ9NVN3 520 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 PSD3Q9NYI0 1048 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 HCN3Q9P1Z3 774 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 SLC22A7Q9Y694 548 aa7.66□□□□□ -1.18
MRPL55-211ENST00000366738 NCOA6Q14686 2063 aaPredicted RBP7.66□□□□□ -1.18
MRPL55-211ENST00000366738 IGLV3-12A0A075B6K2 115 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 URADA6NGE7 173 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 C9JVG2 144 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TXNDC9O14530 226 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 WISP2O76076 250 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 NSA2O95478 260 aaKnown RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ZGLP1P0C6A0 271 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 CD1EP15812 388 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 LBPP18428 481 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 KIR3DL1P43629 444 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 PRRC2AP48634 2157 aaKnown RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ARFIP2P53365 341 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 EMP3P54852 163 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 NME5P56597 212 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ERVK-8P63133 956 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ADORA2A-AS1P86434 159 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TLE4Q04727 773 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 RUNX2Q13950 521 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 FAM53BQ14153 422 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 PTGR1Q14914 329 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 HERC3Q15034 1050 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TLR1Q15399 786 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 NDUFA9Q16795 377 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 MUM1Q2TAK8 710 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TUBB8Q3ZCM7 444 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 AGAP7PQ5VUJ5 663 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 GARNL3Q5VVW2 1013 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 IL23RQ5VWK5 629 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ZNF324BQ6AW86 544 aaPredicted RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 MRM1Q6IN84 353 aaKnown RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 OGFOD2Q6N063 350 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 NOXRED1Q6NXP6 359 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 RPTNQ6XPR3 784 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ACAD11Q709F0 780 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 CPLX4Q7Z7G2 160 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ZCCHC7Q8N3Z6 543 aaKnown RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 LIX1Q8N485 282 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ACOT4Q8N9L9 421 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 FAM47BQ8NA70 645 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TMEM52Q8NDY8 209 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 CDC26Q8NHZ8 85 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ACTRT2Q8TDY3 377 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 NUDT8Q8WV74 236 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 MMABQ96EY8 250 aaPredicted RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 THOC3Q96J01 351 aaKnown RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 EGLN2Q96KS0 407 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 PPP3R2Q96LZ3 170 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 AGAP4Q96P64 663 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TSSK3Q96PN8 268 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 CCT8L2Q96SF2 557 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 CCT7Q99832 543 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 MAPKAP1Q9BPZ7 522 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 SIKE1Q9BRV8 207 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 CENPKQ9BS16 269 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TBCDQ9BTW9 1192 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 CRB3Q9BUF7 120 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 LHPPQ9H008 270 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ZNF385DQ9H6B1 395 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 DDX31Q9H8H2 851 aaKnown RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 COPS7BQ9H9Q2 264 aaPredicted RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ANKHQ9HCJ1 492 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 ZNF304Q9HCX3 659 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 SEMA3GQ9NS98 782 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 AIG1Q9NVV5 245 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 TEX10Q9NXF1 929 aaPredicted RBP7.65□□□□□ -1.18
MRPL55-211ENST00000366738 BAIAP2L1Q9UHR4 511 aa7.65□□□□□ -1.18
MRPL55-211ENST00000366738 MCM8Q9UJA3 840 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms