RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RWDD2BP57060 319 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 FBXW4P57775 412 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 SRYQ05066 204 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 TTLL9Q3SXZ7 439 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 NEPROQ6NW34 567 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 SBSNQ6UWP8 590 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF704Q6ZNC4 412 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 SH2D5Q6ZV89 423 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 OR4N5Q8IXE1 308 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 KLHDC8AQ8IYD2 350 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 LRRC57Q8N9N7 239 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 FAM83FQ8NEG4 500 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 OR5L2Q8NGL0 311 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 NUBPLQ8TB37 319 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 SLC5A11Q8WWX8 675 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 ATL1Q8WXF7 558 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 KCNJ9Q92806 393 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 PPWD1Q96BP3 646 aaKnown RBP7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 CTHRC1Q96CG8 243 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 TRIM44Q96DX7 344 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF597Q96LX8 424 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 RILPQ96NA2 401 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 GBP4Q96PP9 640 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 HAUS8Q9BT25 410 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 SLCO5A1Q9H2Y9 848 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 PIGMQ9H3S5 423 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 PARVBQ9HBI1 364 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 BRD7Q9NPI1 651 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF226Q9NYT6 803 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 IKBKGQ9Y6K9 419 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 NINQ8N4C6 2090 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 ANKRD33BA6NCL7 494 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 HS3ST1O14792 307 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 MSTNO14793 375 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 ERI3O43414 337 aaKnown RBP7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 LIASO43766 372 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 MFAP3LO75121 409 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 SMNDC1O75940 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 CGAP01215 116 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 IFNB1P01574 187 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 CYP4B1P13584 511 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 TNNI3P19429 210 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 SAT1P21673 171 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 CCND1P24385 295 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 PTPN6P29350 595 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 CDKN1AP38936 164 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 KIR2DL2P43627 348 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 STARP49675 285 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 PLA2G16P53816 162 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 CSHL1Q14406 222 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 RBBP5Q15291 538 aaKnown RBP7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 NTRK2Q16620 822 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF470Q6ECI4 717 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 NXPE4Q6UWF7 544 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF793Q6ZN11 406 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 IL17RELQ6ZVW7 336 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 UBE3DQ7Z6J8 389 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF611Q8N823 705 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 TRPV3Q8NET8 790 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 DIO2Q92813 273 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 NEUROG1Q92886 237 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 GAL3ST3Q96A11 431 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 C1orf159Q96HA4 380 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 FAM111AQ96PZ2 611 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 TM9SF2Q99805 663 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 TMEM204Q9BSN7 226 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 NPLQ9BXD5 320 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 IL22Q9GZX6 179 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 CXorf56Q9H5V9 222 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 PSD3Q9NYI0 1048 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 CDC42EP3Q9UKI2 254 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 DAPP1Q9UN19 280 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 SOX13Q9UN79 622 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 PACSIN2Q9UNF0 486 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 LAMP3Q9UQV4 416 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 PCDHA13Q9Y5I0 950 aa7.68□□□□□ -1.18
HMGB1P39-201ENST00000366304 PRR14LQ5THK1 2151 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 NBEAL2Q6ZNJ1 2754 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 IGHV4-30-2A0A087WSY4 118 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 GRID2IPA4D2P6 1211 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 FRG2CA6NGY1 282 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 WASHC1A8K0Z3 465 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 B4DXG7 233 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 EIF3FO00303 357 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 GNB5O14775 395 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 B3GALT2O43825 422 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 FGF17O60258 216 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 PRAMEF4O60810 478 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF189O75820 626 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 HAUS5O94927 633 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 EGR1P18146 543 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 CFPP27918 469 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 CASP3P42574 277 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 SLC1A2P43004 574 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 NPY2RP49146 381 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 PCYT1AP49585 367 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 CDKN2DP55273 166 aa7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 IGLV3-21P80748 117 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P39-201ENST00000366304 SNX1Q13596 522 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms