RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 YBEYP58557 167 aaPredicted RBP3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 RPS4XP62701 263 aaKnown RBP3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 PRAMEF7Q5VXH5 474 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 WDR25Q64LD2 544 aaPredicted RBP3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 RFWD3Q6PCD5 774 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 PEX5LQ8IYB4 626 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 SAMD12Q8N8I0 201 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 MGARPQ8TDB4 240 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 RAB39BQ96DA2 213 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 WBP1Q96G27 269 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 COG3Q96JB2 828 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 RPGRIP1Q96KN7 1286 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 FOXN4Q96NZ1 517 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 ATP6V0BQ99437 205 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 SP140LQ9H930 580 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 ACOXLQ9NUZ1 547 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 TAS2R16Q9NYV7 291 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 AKAP7Q9P0M2 348 aaPredicted RBP3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 APPL1Q9UKG1 709 aa3.37□□□□□ -1.87
RNU6-560P-201ENST00000364007 A0A0U1RQG5 324 aaPredicted RBP3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 MACROD2A1Z1Q3 448 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 MEI4A8MW99 385 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 K7ERI5 159 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 SFTPBP07988 381 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 MELTFP08582 738 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 HLA-DPA1P20036 260 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 FCARP24071 287 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 SPRP35270 261 aaPredicted RBP3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 NSFP46459 744 aaKnown RBP3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 ARF5P84085 180 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 UBXN1Q04323 297 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 EMC2Q15006 297 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 EXOSC7Q15024 291 aaKnown RBP3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 PCK2Q16822 640 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 GPAT3Q53EU6 434 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 UNC50Q53HI1 259 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 ZNF506Q5JVG8 444 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 STEAP1BQ6NZ63 245 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 LINC00518Q8N0U6 118 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 FGFRL1Q8N441 504 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 ICA1LQ8NDH6 482 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 NEK11Q8NG66 645 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 ITLN1Q8WWA0 313 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 ATP6V0A1Q93050 837 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 SLCO4A1Q96BD0 722 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 NTNG2Q96CW9 530 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 CAPNS2Q96L46 248 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 CARD9Q9H257 536 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 TMEM245Q9H330 911 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 IL1RL2Q9HB29 575 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 HMG20BQ9P0W2 317 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 EIF3KQ9UBQ5 218 aaKnown RBP3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 FETUBQ9UGM5 382 aa3.36□□□□□ -1.87
RNU6-560P-201ENST00000364007 BCLAF3A2AJT9 711 aaKnown RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 EEF2KO00418 725 aaKnown RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 TSPAN2O60636 221 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 ABHD2P08910 425 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 MBL2P11226 248 aaPredicted RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 ALDH3B1P43353 468 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 ACADSBP45954 432 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 KLF5Q13887 457 aaPredicted RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 EIPR1Q53HC9 387 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 NHLRC3Q5JS37 347 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 TCHHL1Q5QJ38 904 aaPredicted RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 C1orf189Q5VU69 101 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 NKAIN2Q5VXU1 208 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 LIPJQ5W064 366 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 CDC42EP5Q6NZY7 148 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 ARMCX5Q6P1M9 558 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 TMUB2Q71RG4 321 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 CEACAM19Q7Z692 300 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 CDC20BQ86Y33 519 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 ZNF491Q8N8L2 437 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 RAB3CQ96E17 227 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 SPAG8Q99932 426 aaPredicted RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 DCTN5Q9BTE1 182 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 RBM24Q9BX46 236 aaKnown RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 RCOR3Q9P2K3 495 aaPredicted RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 COPS7AQ9UBW8 275 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 NARFQ9UHQ1 456 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 TRMT6Q9UJA5 497 aaKnown RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 KLHDC2Q9Y2U9 406 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 SLC6A5Q9Y345 797 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 MRPS2Q9Y399 296 aaKnown RBP3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 NPC1L1Q9UHC9 1359 aa3.35□□□□□ -1.87
RNU6-560P-201ENST00000364007 RAI1Q7Z5J4 1906 aaPredicted RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 SYCE3A1L190 88 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 SH2D1BO14796 132 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 FCER2P06734 321 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 TNFRSF4P43489 277 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 HNRNPFP52597 415 aaKnown RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 ZNF131P52739 623 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 NLRP11P59045 1033 aaKnown RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 SRP54P61011 504 aaKnown RBP3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 CMPK2Q5EBM0 449 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 RHBDD2Q6NTF9 364 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 ZNF774Q6NX45 483 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 BNIPLQ7Z465 357 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 ADAMTSL2Q86TH1 951 aa3.34□□□□□ -1.87
RNU6-560P-201ENST00000364007 HIPK1Q86Z02 1210 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms