RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 OXR1Q8N573 874 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 TP53I13Q8NBR0 393 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 TM9SF4Q92544 642 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 UCK2Q9BZX2 261 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 POLR2J3Q9H1A7 115 aaKnown RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 SEMA3GQ9NS98 782 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 CORO2BQ9UQ03 480 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 A0A1B0GVC2 190 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 A6NIN4 97 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 C5orf58C9J3I9 102 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 PLPP1O14494 284 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 KRT75O95678 551 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 SCG5P05408 212 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 OR12D1P0DN82 309 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 RHCEP18577 417 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 PPIBP23284 216 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 MANFP55145 182 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 FCHO2Q0JRZ9 810 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 CRB2Q5IJ48 1285 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 TPGS2Q68CL5 300 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 USP30Q70CQ3 517 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 PHC2Q8IXK0 858 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 GALNT12Q8IXK2 581 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 XAGE5Q8WWM1 108 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 CRELD1Q96HD1 420 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 SRRQ9GZT4 340 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 TMEM39AQ9NV64 488 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 TEX10Q9NXF1 929 aaPredicted RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 SPIN1Q9Y657 262 aaPredicted RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 ZFHX4Q86UP3 3567 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 SNRNP200O75643 2136 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 SCN2AQ99250 2005 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 SERTM1A2A2V5 107 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 HIDE1A8MVS5 230 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 LATO43561 262 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 C1GALT1C1LP0DN25 315 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 APEX1P27695 318 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 PSPHP78330 225 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 OLR1P78380 273 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 HYAL2Q12891 473 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 EIF4HQ15056 248 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 SPDYE7PQ495Y7 208 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 PGBD2Q6P3X8 592 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 APOBEC4Q8WW27 367 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 DIRAS2Q96HU8 199 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 KLHL42Q9P2K6 505 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 COMMD3Q9UBI1 195 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 ANGPT4Q9Y264 503 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 GRM6O15303 877 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 CAPN5O15484 640 aaPredicted RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 CSF3P09919 207 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 CSF2RAP15509 400 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 ITGA2P17301 1181 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 HOXB6P17509 224 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 PTPN5P54829 565 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 C21orf58P58505 322 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 SNRPD2P62316 118 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 ZNF697Q5TEC3 545 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 REEP3Q6NUK4 255 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 LIPIQ6XZB0 460 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 ZNF547Q8IVP9 402 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 ANKRD53Q8N9V6 530 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 LRR1Q96L50 414 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 ZSWIM3Q96MP5 696 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 TMEM38AQ9H6F2 299 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 TXNL4BQ9NX01 149 aaKnown RBP10.03□□□□□ -0.8
SMC3-201ENST00000361804 NTNG1Q9Y2I2 539 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 DYRK1BQ9Y463 629 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 CLCA3PQ9Y6N3 262 aa10.03□□□□□ -0.8
SMC3-201ENST00000361804 EIF3FO00303 357 aaPredicted RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 DPM1O60762 260 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 TP53P04637 393 aaPredicted RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 CCL5P13501 91 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 HOXB3P14651 431 aaPredicted RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 PRLHRP49683 370 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 LARS2Q15031 903 aaKnown RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 P2RY14Q15391 338 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 GAB4Q2WGN9 574 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 DCST1Q5T197 706 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 THOC7Q6I9Y2 204 aaKnown RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 PARS2Q7L3T8 475 aaKnown RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 IQCHQ86VS3 1027 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 LILRB4Q8NHJ6 448 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 GOT1L1Q8NHS2 421 aaPredicted RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 SLC5A11Q8WWX8 675 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 ING5Q8WYH8 240 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 KLHL6Q8WZ60 621 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 TMEM80Q96HE8 168 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 DEPDC7Q96QD5 511 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 DYRK4Q9NR20 520 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 CXXC1Q9P0U4 656 aaPredicted RBP10.02□□□□□ -0.8
SMC3-201ENST00000361804 TRPC4Q9UBN4 977 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 TAC3Q9UHF0 121 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 GPSM3Q9Y4H4 160 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 SCN3AQ9NY46 2000 aa10.02□□□□□ -0.8
SMC3-201ENST00000361804 ATG2BQ96BY7 2078 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 OTOL1A6NHN0 477 aaPredicted RBP10.02□□□□□ -0.81
SMC3-201ENST00000361804 TMCC2O75069 709 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 SOD1P00441 154 aa10.02□□□□□ -0.81
SMC3-201ENST00000361804 LALBAP00709 142 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms