RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MYF5P13349 255 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 COX7A2P14406 83 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 HOXB9P17482 250 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 GP2P55259 537 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 EMX1Q04741 257 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 PIGFQ07326 219 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 RAPSNQ13702 412 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 ANGPT1Q15389 498 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 C14orf28Q4W4Y0 310 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 ANKRD34AQ69YU3 496 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC16A12Q6ZSM3 486 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 ANKRD46Q86W74 232 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 ZBTB44Q8NCP5 570 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 WDR48Q8TAF3 677 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 CREB3L4Q8TEY5 395 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 VMP1Q96GC9 406 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 MACROD1Q9BQ69 325 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 REXO4Q9GZR2 422 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 AICDAQ9GZX7 198 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 IL21RQ9HBE5 538 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 GPR179Q6PRD1 2367 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 A0A0J9YY10 115 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 OR2A25A4D2G3 310 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 LILRA5A6NI73 299 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 RHPN2P1A8MT19 583 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 CLIC1O00299 241 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 PVRP15151 417 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 FPR1P21462 350 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 PTPN6P29350 595 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 RXRGP48443 463 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 BCAP31P51572 246 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 C21orf58P58505 322 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 MVKQ03426 396 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 TGM3Q08188 693 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 ATP1A4Q13733 1029 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 NPTX1Q15818 432 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 DGUOKQ16854 277 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 VMACQ2NL98 169 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 HKDC1Q2TB90 917 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 PEAR1Q5VY43 1037 aaPredicted RBP12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 ZCCHC8Q6NZY4 707 aaKnown RBP12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 BMP8AQ7Z5Y6 402 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 RABEPKQ7Z6M1 372 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 NUDT13Q86X67 352 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 ZBTB8BQ8NAP8 495 aaPredicted RBP12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 SRFBP1Q8NEF9 429 aaKnown RBP12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 FAR1Q8WVX9 515 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 PANX1Q96RD7 426 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 SORBS1Q9BX66 1292 aaKnown RBP12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 RIBC2Q9H4K1 309 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 DUSP21Q9H596 190 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 GMPPBQ9Y5P6 360 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 CORINQ9Y5Q5 1042 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 UNC13CQ8NB66 2214 aa12.46□□□□□ -0.42
SQSTM1-201ENST00000360718 LRIT2A6NDA9 550 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 MYO1GB0I1T2 1018 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 PLPP1O14494 284 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CASC3O15234 703 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 KLHL18O94889 574 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 GABARAPO95166 117 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 EPN2O95208 641 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 GBAP04062 536 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 STXBP1P61764 594 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CSNK2BP67870 215 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 IL1RL1Q01638 556 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 RELAQ04206 551 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 RGS1Q08116 209 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 AQP6Q13520 282 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 SIM2Q14190 667 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CTF1Q16619 201 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 TRIM16LQ309B1 348 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 KDM4DQ6B0I6 523 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 OR4F3Q6IEY1 312 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 GALNT5Q7Z7M9 940 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 IGFN1Q86VF2 1251 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 GATAD2AQ86YP4 633 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 OR2I1PQ8NGU4 316 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CNIH3Q8TBE1 160 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 MYNNQ9NPC7 610 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 C11orf16Q9NQ32 467 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 PAK1IP1Q9NWT1 392 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 ZSCAN32Q9NX65 697 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 ADAM29Q9UKF5 820 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 WBP11Q9Y2W2 641 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 RP1P56715 2156 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 SCAMP2O15127 329 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 XPNPEP2O43895 674 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 JRKO75564 520 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 PROS1P07225 676 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 SLC35G6P0C7Q6 338 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 KDELR2P33947 212 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 HOXD12P35452 270 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CDKN2CP42773 168 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 ST13P50502 369 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 MAPK12P53778 367 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 COL9A2Q14055 689 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms