RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 AKR1C2P52895 323 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 LRRC73Q5JTD7 316 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 KCTD9Q7L273 389 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 GALNT11Q8NCW6 608 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 OR51I1Q9H343 314 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CARD8Q9Y2G2 431 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 FLRT2O43155 660 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 C5AR1P21730 350 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CD83Q01151 205 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 ZNF267Q14586 743 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 MTFR2Q6P444 385 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 ZNF572Q7Z3I7 529 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 ZUFSPQ96AP4 578 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TGM7Q96PF1 710 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 GPR174Q9BXC1 333 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 OARD1Q9Y530 152 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 LOC100509620A0A075B734 347 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SCAMP1O15126 338 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 EMC8O43402 210 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 PPP1R11O60927 126 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 TIA1P31483 386 aaKnown RBP eCLIP9.29□□□□□ -0.921e-6■■■■□ 21
CUX1-203ENST00000360264 OR4D2P58180 307 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 ATP6AP1Q15904 470 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 HAGHLQ6PII5 290 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 GRASPQ7Z6J2 395 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 PXKQ7Z7A4 578 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CMTM1Q8IZ96 169 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 OR5AK3PQ8NH89 298 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 PITX2Q99697 317 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CCDC32Q9BV29 185 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 DMAC2Q9NW81 257 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 RGPD8O14715 1765 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 SUSD1Q6UWL2 747 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 LANCL3Q6ZV70 420 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PDSS2Q86YH6 399 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 TOR1AIP2Q8NFQ8 470 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 MCM3APO60318 1980 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 A0A0G2JN53 185 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PRKCGP05129 697 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PITRM1Q5JRX3 1037 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ZNF280BQ86YH2 543 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 C1orf52Q8N6N3 182 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 SLC39A1Q9NY26 324 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 TCRBV21S2A2A0A5A6 115 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 A8MUI8 341 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 CH25HO95992 272 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 GSK3BP49841 420 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 EIF4HQ15056 248 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 ESCO2Q56NI9 601 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PIGGQ5H8A4 983 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ZNF442Q9H7R0 627 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 CFAP20Q9Y6A4 193 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 CHD3Q12873 2000 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 SLC16A8O95907 504 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 P04436 131 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 AKR1C8PQ5T2L2 129 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 HMBOX1Q6NT76 420 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 SLC39A4Q6P5W5 647 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ZNF852Q6ZMS4 543 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 HERC2P3Q9BVR0 1158 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PCDHAC2Q9Y5I4 1007 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 IGKV6D-41A0A0C4DH26 115 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 UGDHO60701 494 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PGAM5Q96HS1 289 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 SLC6A7Q99884 636 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 C17orf113A0A1B0GUU1 675 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 HTR1EP28566 365 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ART1P52961 327 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 GABARAPL2P60520 117 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PRPS1P60891 318 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ARL5BQ96KC2 179 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 RANBP9Q96S59 729 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 PCDHGA8Q9Y5G5 932 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 AMY2BP19961 511 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 CAPN3P20807 821 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 MC3RP41968 323 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 GRM2Q14416 872 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 SLC22A10Q63ZE4 541 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ERMP1Q7Z2K6 904 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 RPF2Q9H7B2 306 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 TP53TG5Q9Y2B4 290 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 CHRNA4P43681 627 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 FBXO48Q5FWF7 155 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 FITM2Q8N6M3 262 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 CLEC4CQ8WTT0 213 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 ADAMTS10Q9H324 1103 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 RLIMQ9NVW2 624 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 A0A1W2PP55 124 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 GLSO94925 669 aaPredicted RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 INMTO95050 263 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 TBX18O95935 607 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 IGHEP01854 428 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 TSTQ16762 297 aaKnown RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 OR4F6Q8NGB9 312 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 SH3YL1Q96HL8 342 aaPredicted RBP9.28□□□□□ -0.92
CUX1-203ENST00000360264 ACTRT3Q9BYD9 372 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 CD244Q9BZW8 370 aa9.28□□□□□ -0.92
CUX1-203ENST00000360264 TOR3AQ9H497 397 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms