RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 GOLGA8OA6NCC3 632 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 GOLGA8NF8WBI6 632 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 DIAPH2O60879 1101 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 TACR1P25103 407 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 RPL3P39023 403 aaKnown RBP17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ERVK-8P63133 956 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 EMX2Q04743 252 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SMU1Q2TAY7 513 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ZNF750Q32MQ0 723 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 FAM180BQ6P0A1 224 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 R3HCC1LQ7Z5L2 792 aaKnown RBP17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 KIF2BQ8N4N8 673 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ZADH2Q8N4Q0 377 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 LSM14AQ8ND56 463 aaKnown RBP17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SLC2A12Q8TD20 617 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 DOK4Q8TEW6 326 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PTPMT1Q8WUK0 201 aaPredicted RBP17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 EGLN2Q96KS0 407 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 FCRL1Q96LA6 429 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ZNF354BQ96LW1 612 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ZNF552Q9H707 407 aaPredicted RBP17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SLCO1B3Q9NPD5 702 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SLC35C2Q9NQQ7 365 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SH3BP4Q9P0V3 963 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ERVK-19Q9WJR5 959 aa17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 DYTNA2CJ06 578 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 DPM1O60762 260 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 FCRLBQ6BAA4 426 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 HSDL2Q6YN16 418 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ACAD11Q709F0 780 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 FAM9CQ8IZT9 166 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 NFAM1Q8NET5 270 aaPredicted RBP17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 OR1N1Q8NGS0 311 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 THAP3Q8WTV1 239 aaPredicted RBP17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PRPF18Q99633 342 aaKnown RBP17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SMAD5Q99717 465 aaKnown RBP17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 REEP4Q9H6H4 257 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CES1P1Q9UKY3 287 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 USH1CQ9Y6N9 552 aa17.87■□□□□ 0.45
HLA-DRB1-201ENST00000360004 MGAQ8IWI9 3026 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 A0A1W2PS29 197 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 TCP11X1B4DZS4 312 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SDHDO14521 159 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 FCHO1O14526 889 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ZFAND5O76080 213 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 EPHA3P29320 983 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 GALNSP34059 522 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 MPIP34949 423 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 NCBP2P52298 156 aaKnown RBP eCLIP17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ARG2P78540 354 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 MFAP5Q13361 173 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 RPS6KA2Q15349 733 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 MEP1AQ16819 746 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 B3GNTL1Q67FW5 361 aaPredicted RBP17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 RNF111Q6ZNA4 994 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SLC29A4Q7RTT9 530 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 HPS6Q86YV9 775 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CCDC116Q8IYX3 515 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 AMER2Q8N7J2 671 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 TEX19Q8NA77 164 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ELP5Q8TE02 316 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SENP5Q96HI0 755 aaPredicted RBP17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 FBXL20Q96IG2 436 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CDCP1Q9H5V8 836 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 WDR55Q9H6Y2 383 aaPredicted RBP17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 STMN3Q9NZ72 180 aa17.86■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PDPK1O15530 556 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 G6PDP11413 515 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CASRP41180 1078 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 NFATC3Q12968 1075 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PTGR1Q14914 329 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SPRED3Q2MJR0 410 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 HLA-DQA1Q5Y7H0 255 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ANKRD26P1Q6NSI1 321 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PCSK4Q6UW60 755 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 DGAT2L6Q6ZPD8 337 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SPATA19Q7Z5L4 167 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 RPS19BP1Q86WX3 136 aaKnown RBP17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 VWA5B2Q8N398 1253 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ADCY4Q8NFM4 1077 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 OR5L2Q8NGL0 311 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ZFP28Q8NHY6 868 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CNRIP1Q96F85 164 aaPredicted RBP17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 GAL3ST4Q96RP7 486 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 LMF1Q96S06 567 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CXorf21Q9HAI6 301 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ATAD3AQ9NVI7 634 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 BCAP29Q9UHQ4 241 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 MAPRE3Q9UPY8 281 aa17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 HEMK1Q9Y5R4 338 aaPredicted RBP17.85■□□□□ 0.45
HLA-DRB1-201ENST00000360004 K7EM74 188 aa17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 POLR3GO15318 223 aaPredicted RBP17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 DDAH2O95865 285 aa17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ATP1B1P05026 303 aa17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 VIMP08670 466 aaKnown RBP17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PRPS1L1P21108 318 aa17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PTGER1P34995 402 aa17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 GPC1P35052 558 aa17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ACER2Q5QJU3 275 aa17.84■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PTRH1Q86Y79 214 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms