RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 OR9A4Q8NGU2 314 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 UCN3Q969E3 161 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 AMDHD1Q96NU7 426 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 GFM1Q96RP9 751 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 GLIPR2Q9H4G4 154 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 RPF2Q9H7B2 306 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 CLK4Q9HAZ1 481 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 ENAMQ9NRM1 1142 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 CES1P1Q9UKY3 287 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 ATXN7L1Q9ULK2 861 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 USP22Q9UPT9 525 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 ERVK-11Q9UQG0 969 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 A0A0A6YYC8 382 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SPAARA0A1B0GVQ0 90 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 TCRBV3S1A0A5B6 114 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 I3L1I5 382 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SGK494L7N484 410 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 CTSBP07858 339 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 RNH1P13489 461 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 GGT1P19440 569 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 GZMMP51124 257 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 ITGA1P56199 1179 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 POLE2P56282 527 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 RHDQ02161 417 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 VAC14Q08AM6 782 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 FADDQ13158 208 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 ILKQ13418 452 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 CEBPEQ15744 281 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 GPR19Q15760 415 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 FAM214AQ32MH5 1076 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SPDYE7PQ495Y7 208 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 YOD1Q5VVQ6 348 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 CPZQ66K79 652 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 GLYATQ6IB77 296 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 FAM180BQ6P0A1 224 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 TLDC1Q6P9B6 456 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 ZNF551Q7Z340 670 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 GPR135Q8IZ08 494 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 DTWD1Q8N5C7 304 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 OR4K14Q8NGD5 310 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 OR52N2Q8NGI0 321 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 PSMA8Q8TAA3 256 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 PNPT1Q8TCS8 783 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 PYDC1Q8WXC3 89 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 CNRIP1Q96F85 164 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 NSMCE2Q96MF7 247 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 CSF3RQ99062 836 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SPRTNQ9H040 489 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 CXorf36Q9H7Y0 433 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SEMA3GQ9NS98 782 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 STX18Q9P2W9 335 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SNX8Q9Y5X2 465 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 SPTBP11277 2137 aa13.04□□□□□ -0.32
PDLIM5-203ENST00000359265 BLACEA4D250 179 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 H0YIG0 161 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 CXCR6O00574 342 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 NTRK1P04629 796 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 ANPEPP15144 967 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 NCK1P16333 377 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 MPIP34949 423 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 ACY1Q03154 408 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 RGNQ15493 299 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 TMEM64Q6YI46 380 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 SPPL2CQ8IUH8 684 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 ZZZ3Q8IYH5 903 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 CLEC4FQ8N1N0 589 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 LRRC25Q8N386 305 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 OR5T3Q8NGG3 340 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 OR5AK3PQ8NH89 298 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 FIG4Q92562 907 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 TANKQ92844 425 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 NCLNQ969V3 563 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 MOAP1Q96BY2 351 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 MVB12AQ96EY5 273 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 EFHD1Q9BUP0 239 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 TRIM4Q9C037 500 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 SIRT3Q9NTG7 399 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 CUTCQ9NTM9 273 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 PDP2Q9P2J9 529 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 SERTAD3Q9UJW9 196 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 ACSL6Q9UKU0 697 aa13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 MRPS33Q9Y291 106 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-203ENST00000359265 IGHV5-10-1A0A0J9YXX1 117 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 D6RAR5 112 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 NTN3O00634 580 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 CHST10O43529 356 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 FOXS1O43638 330 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 CBFA2T3O75081 653 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 MED26O95402 600 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 GPIP06744 558 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 C8orf89P0DMQ9 161 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 FOLR1P15328 257 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 PSMA4P25789 261 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 PPP2R1BP30154 601 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms