RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 OTX2P32243 289 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 STT3AP46977 705 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 EEF1A2Q05639 463 aaKnown RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 HSPB3Q12988 150 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 TLR1Q15399 786 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 CPZQ66K79 652 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 PPP1R32Q7Z5V6 425 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 CCDC86Q9H6F5 360 aaKnown RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 ANKRA2Q9H9E1 313 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SERHLQ9NQF3 203 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 GIMAP4Q9NUV9 329 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 ARL8BQ9NVJ2 186 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 TMEM45AQ9NWC5 275 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 KCND3Q9UK17 655 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 A0A1W2PRB8 838 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 HRKO00198 91 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SLC22A2O15244 555 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 IFNA16P05015 189 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 CD63P08962 238 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 CT62P0C5K7 136 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 NTSP30990 170 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 CDKN2CP42773 168 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 CDK9P50750 372 aaKnown RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 TERF2Q15554 542 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SFT2D3Q587I9 215 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 PAGE3Q5JUK9 113 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 RETREG3Q86VR2 466 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 ST13P4Q8IZP2 240 aaPredicted RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SIMC1Q8NDZ2 872 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SNIP1Q8TAD8 396 aaKnown RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 KCNE4Q8WWG9 221 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 KIAA1143Q96AT1 154 aaPredicted RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 DGAT2Q96PD7 388 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 WDR77Q9BQA1 342 aaPredicted RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SEMA3GQ9NS98 782 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 C1QTNF9BB2RNN3 333 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 SOCS6O14544 535 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 OR10H2O60403 315 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 C1QTNF9P0C862 333 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 NT5EP21589 574 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 OR4D2P58180 307 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 MGAT2Q10469 447 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 SERTAD2Q14140 314 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 ATP1A1-AS1Q5TC04 95 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 FAM111BQ6SJ93 734 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 PTPMT1Q8WUK0 201 aaPredicted RBP23.73■■□□□ 1.39
SSBP3-202ENST00000357475 METTL21AQ8WXB1 218 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 KAT2AQ92830 837 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 TRIM4Q9C037 500 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 SLC6A13Q9NSD5 602 aa23.73■■□□□ 1.39
SSBP3-202ENST00000357475 FAM120CQ9NX05 1096 aaKnown RBP23.73■■□□□ 1.39
SSBP3-202ENST00000357475 A0A1W2PP18 115 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 MASP2O00187 686 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 RNASET2O00584 256 aaKnown RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 CREG1O75629 220 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 CPSF4O95639 269 aaKnown RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 C1QCP02747 245 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 ATP1B1P05026 303 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 ABCB1P08183 1280 aaPredicted RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 COX4I1P13073 169 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 MMP11P24347 488 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 MANFP55145 182 aaKnown RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 HBA1P69905 142 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 MRPS35P82673 323 aaKnown RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 KIRREL2Q6UWL6 708 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 TRPM8Q7Z2W7 1104 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 CPEB2Q7Z5Q1 589 aaKnown RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 CLEC4FQ8N1N0 589 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 ZNF248Q8NDW4 579 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 ZBED6CLQ96FA7 236 aaPredicted RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 ACSS1Q9NUB1 689 aaPredicted RBP23.72■■□□□ 1.39
SSBP3-202ENST00000357475 MRGBPQ9NV56 204 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 SLAMF8Q9P0V8 285 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 DKK4Q9UBT3 224 aa23.72■■□□□ 1.39
SSBP3-202ENST00000357475 LOC102723996A0A087X1L8 192 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 PRSS51A0A1B0GVH4 220 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 CFLARO15519 480 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 KLK10O43240 276 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 SEC24DO94855 1032 aaPredicted RBP23.71■■□□□ 1.39
SSBP3-202ENST00000357475 MPIP34949 423 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 SSPNQ14714 243 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 PRICKLE4Q2TBC4 344 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 ZNF628Q5EBL2 1059 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 FAM91A1Q658Y4 838 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 TMEM107Q6UX40 140 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 DNAJC14Q6Y2X3 702 aaPredicted RBP23.71■■□□□ 1.39
SSBP3-202ENST00000357475 ZNF321PQ8N8H1 164 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 ADAMTS17Q8TE56 1095 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 RBM18Q96H35 190 aaKnown RBP23.71■■□□□ 1.39
SSBP3-202ENST00000357475 NPAS2Q99743 824 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 CXorf21Q9HAI6 301 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 SIRT3Q9NTG7 399 aaPredicted RBP23.71■■□□□ 1.39
SSBP3-202ENST00000357475 MAT2BQ9NZL9 334 aa23.71■■□□□ 1.39
SSBP3-202ENST00000357475 C17orf105B2RV13 164 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 EFSO43281 561 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 CBX6O95503 412 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 GSNP06396 782 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 CYC1P08574 325 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 TNNI3P19429 210 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms