RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 OR2L8Q8NGY9 312 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 ITPKCQ96DU7 683 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 HSPBAP1Q96EW2 488 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 IGSF5Q9NSI5 407 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 BTNL2Q9UIR0 455 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 SCML1Q9UN30 329 aa11.24□□□□□ -0.61
COL9A1-202ENST00000357250 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 VILLO15195 856 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 CYP17A1P05093 508 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 HLA-EP13747 358 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SLAMF1Q13291 335 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 TOR1AIP2Q8NFQ8 470 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 OR56A3Q8NH54 315 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 OR52P1PQ8NH57 321 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 TESCQ96BS2 214 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 HSPA12BQ96MM6 686 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 HOXD1Q9GZZ0 328 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ARNT2Q9HBZ2 717 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SMURF1Q9HCE7 757 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 COPZ2Q9P299 210 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ABCD2Q9UBJ2 740 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 EXTL2Q9UBQ6 330 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 KLHL21Q9UJP4 597 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 STUB1Q9UNE7 303 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 FARS2O95363 451 aaKnown RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ITGA5P08648 1049 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 C5AR1P21730 350 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 OR1E2P47887 323 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 RAB28P51157 221 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 HK3P52790 923 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 CD83Q01151 205 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 MPP7Q5T2T1 576 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SNX29P2Q8IUI4 249 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 HUS1BQ8NHY5 278 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 LMX1AQ8TE12 382 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 AKAP1Q92667 903 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 CHFRQ96EP1 664 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 RANBP3Q9H6Z4 567 aaPredicted RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 CARD8Q9Y2G2 431 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 NOP16Q9Y3C1 178 aaKnown RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 C2orf92A0A1B0GVN3 265 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SLC1A7O00341 560 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 RBBP9O75884 186 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 BPIP17213 487 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 POLR2CP19387 275 aaPredicted RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 MAP2K3P46734 347 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 GCGRP47871 477 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 RTP2Q5QGT7 225 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 TCEAL8Q8IYN2 117 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 OR10Q1Q8NGQ4 319 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 THAP4Q8WY91 577 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SECISBP2Q96T21 854 aaKnown RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ZNF559Q9BR84 538 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 GTPBP2Q9BX10 602 aaKnown RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 MLXQ9UH92 298 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 MAB21L2Q9Y586 359 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 PSMD9O00233 223 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ARNTLO00327 626 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 HCKP08631 526 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 TAS2R38P59533 333 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 CDKL1Q00532 357 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 DHCR24Q15392 516 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 AAK1Q2M2I8 961 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 TEX26Q8N6G2 289 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ARFGAP1Q8N6T3 406 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ISG20Q96AZ6 181 aaKnown RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SGTBQ96EQ0 304 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 GAL3ST1Q99999 423 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 MROQ9BYG7 248 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ACOT13Q9NPJ3 140 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 SMOXQ9NWM0 555 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 IL17CQ9P0M4 197 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 WASF3Q9UPY6 502 aa11.23□□□□□ -0.61
COL9A1-202ENST00000357250 DNMT3AQ9Y6K1 912 aaPredicted RBP11.23□□□□□ -0.61
COL9A1-202ENST00000357250 ANKRD12Q6UB98 2062 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 MYH9P35579 1960 aaKnown RBP11.22□□□□□ -0.61
COL9A1-202ENST00000357250 CLIC3O95833 236 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 PORP16435 677 aaPredicted RBP11.22□□□□□ -0.61
COL9A1-202ENST00000357250 PGCP20142 388 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 DHPSP49366 369 aaPredicted RBP11.22□□□□□ -0.61
COL9A1-202ENST00000357250 PSMA6P60900 246 aaKnown RBP11.22□□□□□ -0.61
COL9A1-202ENST00000357250 LSAMPQ13449 338 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 GBX1Q14549 363 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 MORN1Q5T089 497 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 OR4C11Q6IEV9 310 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 KDELC1Q6UW63 502 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 OR52B6Q8NGF0 335 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 CNIH3Q8TBE1 160 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 PDE7BQ9NP56 450 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 ERVK-18Q9QC07 812 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 RHCGQ9UBD6 479 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 PLAGL1Q9UM63 463 aa11.22□□□□□ -0.61
COL9A1-202ENST00000357250 A0A1B0GUL6 1792 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms