RNA–Protein interactions for RNA: ENST00000356786.9

CCDC88B-202, Transcript of coiled-coil domain containing 88B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC88B, Length 4,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-202ENST00000356786 OR4N4Q8N0Y3 316 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 ARFGAP1Q8N6T3 406 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 TBL1XR1Q9BZK7 514 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 RABL2BQ9UNT1 228 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 ENPP4Q9Y6X5 453 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 A0A0U1RQF3 1178 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 A0A1W2PRU2 124 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 RFPL3O75679 317 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 LAMP1P11279 417 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 CCND3P30281 292 aaPredicted RBP18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 C18orf21Q32NC0 220 aaPredicted RBP18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 OR4K5Q8NGD3 323 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 PCYT2Q99447 389 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 ZNF304Q9HCX3 659 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 LRRTM2O43300 516 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 PAK4O96013 591 aaPredicted RBP18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 PCSK6P29122 969 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 C21orf33P30042 268 aaPredicted RBP18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 FAM189A2Q15884 450 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 LETMD1Q6P1Q0 360 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 GPRIN1Q7Z2K8 1008 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 HDDC3Q8N4P3 179 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 SCAMP4Q969E2 229 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 WDR26Q9H7D7 661 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 DCAF13Q9NV06 445 aaKnown RBP18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 OLAHQ9NV23 265 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 A0A1B0GVC2 190 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 KMOO15229 486 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 HSD3B1P14060 373 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 HSD3B2P26439 372 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 AGTR1P30556 359 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 SOX3P41225 446 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 BAIAP2L2Q6UXY1 529 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 INPP5KQ9BT40 448 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 C14orf166Q9Y224 244 aaKnown RBP18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 GPR52Q9Y2T5 361 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
CCDC88B-202ENST00000356786 H7BY64 318 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 RGS9O75916 674 aaPredicted RBP18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PRSS56P0CW18 603 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 MAGEA6P43360 314 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 SLC22A10Q63ZE4 541 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 MTFR2Q6P444 385 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 C6orf120Q7Z4R8 191 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PARP16Q8N5Y8 322 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 RPL3LQ92901 407 aaKnown RBP18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 IGSF8Q969P0 613 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PRAP1Q96NZ9 151 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PLAGL1Q9UM63 463 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 TRBV2A0A0J9YWF9 115 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 CTDSP2O14595 271 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PPM1BO75688 479 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 ACTC1P68032 377 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 ACTA1P68133 377 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 CLDN10P78369 228 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 SSX6Q7RTT6 188 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 ZSCAN1Q8NBB4 408 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 METTL21AQ8WXB1 218 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 SGCDQ92629 289 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 THRSPQ92748 146 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 ACOT13Q9NPJ3 140 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 COPS7AQ9UBW8 275 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PRKXP51817 358 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 IRF5Q13568 498 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 GAS6Q14393 721 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 GALNT11Q8NCW6 608 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 OR6N2Q8NGY6 317 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 MFSD8Q8NHS3 518 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 C3orf30Q96M34 536 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 POU2F3Q9UKI9 436 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PCDHGB2Q9Y5G2 931 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 HEBP2Q9Y5Z4 205 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 ARPC5O15511 151 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 ZNF208O43345 1280 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 C1GALT1C1LP0DN25 315 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PLAG1Q6DJT9 500 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 ALG1LQ6GMV1 187 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 IQCF1Q8N6M8 205 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 CYB5D2Q8WUJ1 264 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 RGCCQ9H4X1 137 aa18.68■□□□□ 0.58
CCDC88B-202ENST00000356786 PPP6CO00743 305 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 GKN3PP0CG01 181 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 OSMP13725 252 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 UGT2B10P36537 528 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 SLC6A9P48067 706 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 METTL4Q8N3J2 472 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 KCNN3Q9UGI6 736 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 LTBP3Q9NS15 1303 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 ITGA5P08648 1049 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 MSL3P1P0C860 447 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 TNFSF8P32971 234 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 ZNF584Q8IVC4 421 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 MS4A15Q8N5U1 240 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 TEPSINQ96N21 525 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 GON7Q9BXV9 100 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 HAPLN2Q9GZV7 340 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 SEC61A2Q9H9S3 476 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 Q9N2J8 555 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 OR6C74A6NCV1 312 aa18.67■□□□□ 0.58
CCDC88B-202ENST00000356786 M0R129 80 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms