RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 FAM219BQ5XKK7 198 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 ATG16L1Q676U5 607 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 C18orf63Q68DL7 685 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 IKBIPQ70UQ0 350 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 CLNKQ7Z7G1 428 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 LRRC34Q8IZ02 419 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SHISA5Q8N114 240 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 MORN4Q8NDC4 146 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 NFAM1Q8NET5 270 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 FDCSPQ8NFU4 85 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 MGARPQ8TDB4 240 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 C16orf78Q8WTQ4 265 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 DAZLQ92904 295 aaKnown RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 ANKRD9Q96BM1 317 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 C11orf24Q96F05 449 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 VMP1Q96GC9 406 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 APIPQ96GX9 242 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF764Q96H86 408 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 THOC3Q96J01 351 aaKnown RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 PPP3R2Q96LZ3 170 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 DGAT2Q96PD7 388 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 HBEGFQ99075 208 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SORT1Q99523 831 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 NUDT9Q9BW91 350 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 RNF32Q9H0A6 362 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 MRPL18Q9H0U6 180 aaKnown RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SLC25A18Q9H1K4 315 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 EPS8L2Q9H6S3 715 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 RPF2Q9H7B2 306 aaKnown RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 MYNNQ9NPC7 610 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 C1orf109Q9NX04 203 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 TEX10Q9NXF1 929 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 TP53TG5Q9Y2B4 290 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 FIS1Q9Y3D6 152 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 TRAF6Q9Y4K3 522 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 CCL27Q9Y4X3 112 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 IGHV3-20A0A0C4DH32 117 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 EIF4E1BA6NMX2 242 aaKnown RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 TMEM233B4DJY2 109 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 F8W735 103 aaPredicted RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 LSM1O15116 133 aaKnown RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ATP8B1O43520 1251 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ITM2AO43736 263 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 TBX19O60806 448 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SNNO75324 88 aaPredicted RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 LYPLA1O75608 230 aaPredicted RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 GPR75O95800 540 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 IL3P08700 152 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ITGAMP11215 1152 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 DRD2P14416 443 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 DDX5P17844 614 aaKnown RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 PIK3R1P27986 724 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SERPINB3P29508 390 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 HK2P52789 917 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 PPP2R2AP63151 447 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 RPL38P63173 70 aaKnown RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 FOLH1Q04609 750 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 BST1Q10588 318 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 BTBD16Q32M84 506 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 UGT3A2Q3SY77 523 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SPDYAQ5MJ70 313 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 NDUFAF5Q5TEU4 345 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 FAM71E1Q6IPT2 247 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 H3F3CQ6NXT2 135 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SLC48A1Q6P1K1 146 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SCIMPQ6UWF3 145 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 IGFL2Q6UWQ7 119 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 Q6ZS46 218 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 PKD1L2Q7Z442 2459 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 DDIASQ8IXT1 998 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SAMD14Q8IZD0 417 aaPredicted RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ST13P4Q8IZP2 240 aaPredicted RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SLC5A8Q8N695 610 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 GALNT11Q8NCW6 608 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 B3GNT7Q8NFL0 401 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 DNAJB14Q8TBM8 379 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 BRIX1Q8TDN6 353 aaKnown RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 TM4SF18Q96CE8 201 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 C19orf60Q96EN9 201 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 LMF1Q96S06 567 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 PAIP2Q9BPZ3 127 aaKnown RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 MESP1Q9BRJ9 268 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 EBPLQ9BY08 206 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ALOXE3Q9BYJ1 711 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SEMA4CQ9C0C4 833 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ILKAPQ9H0C8 392 aaPredicted RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 TUBB1Q9H4B7 451 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF552Q9H707 407 aaPredicted RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 AKTIPQ9H8T0 292 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 KCNK13Q9HB14 408 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 PNO1Q9NRX1 252 aaKnown RBP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 GIMAP4Q9NUV9 329 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.7□□□□□ -1.82
CNOT4-202ENST00000356162 THAP1Q9NVV9 213 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ASIC5Q9NY37 505 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 EHD3Q9NZN3 535 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ABI3Q9P2A4 366 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 VTI1BQ9UEU0 232 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ZDHHC2Q9UIJ5 367 aa3.7□□□□□ -1.82
CNOT4-202ENST00000356162 ENTPD4Q9Y227 616 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms