RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 NDUFAF4Q9P032 175 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 C19orf81C9J6K1 198 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 TNFRSF11BO00300 401 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 CRYBA1P05813 215 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 TFPIP10646 304 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 PAICSP22234 425 aaKnown RBP14.98□□□□□ -0.01
RTN3-205ENST00000356000 ACTR1AP61163 376 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 PITX1P78337 314 aaPredicted RBP14.98□□□□□ -0.01
RTN3-205ENST00000356000 TNFRSF17Q02223 184 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 IL10RBQ08334 325 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 PLK5Q496M5 336 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 DHRS7BQ6IAN0 325 aaPredicted RBP14.98□□□□□ -0.01
RTN3-205ENST00000356000 MZT2AQ6P582 158 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 DEFB106AQ8N104 65 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 C7orf31Q8N865 590 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 ZNF382Q96SR6 550 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 AGO3Q9H9G7 860 aaKnown RBP14.98□□□□□ -0.01
RTN3-205ENST00000356000 C11orf16Q9NQ32 467 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 SERHLQ9NQF3 203 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 C14orf105Q9NVL8 296 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 MED11Q9P086 117 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 CHST2Q9Y4C5 530 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 ASB1Q9Y576 335 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 NUP205Q92621 2012 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 GPR37O15354 613 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 KLK8O60259 260 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 SLC19A2O60779 497 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 ADAMTS4O75173 837 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 RP2O75695 350 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 GABRA1P14867 456 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 NFYAP23511 347 aaPredicted RBP14.97□□□□□ -0.01
RTN3-205ENST00000356000 ERVPABLB-1P60509 514 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 SNRPEP62304 92 aaKnown RBP14.97□□□□□ -0.01
RTN3-205ENST00000356000 RAET1GQ6H3X3 334 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 PGAP1Q75T13 922 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 SERPINA11Q86U17 422 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 DMRTC2Q8IXT2 367 aaPredicted RBP14.97□□□□□ -0.01
RTN3-205ENST00000356000 LAS2Q8IYD9 372 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 KLHL36Q8N4N3 616 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 BPIFCQ8NFQ6 507 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 BEST4Q8NFU0 473 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 PMM1Q92871 262 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 TCEAL7Q9BRU2 100 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 FAM124BQ9H5Z6 455 aaPredicted RBP14.97□□□□□ -0.01
RTN3-205ENST00000356000 CRYL1Q9Y2S2 319 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 XKP51811 444 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 TPI1P60174 286 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 RBBP4Q09028 425 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 ECH1Q13011 328 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 PTGES3Q15185 160 aaKnown RBP14.97□□□□□ -0.01
RTN3-205ENST00000356000 CCDC157Q569K6 752 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 PDE12Q6L8Q7 609 aaKnown RBP14.97□□□□□ -0.01
RTN3-205ENST00000356000 TMIGD1Q6UXZ0 262 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 OR14A16Q8NHC5 309 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 HPDLQ96IR7 371 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 UBL7Q96S82 380 aaPredicted RBP14.97□□□□□ -0.01
RTN3-205ENST00000356000 HBEGFQ99075 208 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 TMPRSS13Q9BYE2 586 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 SAP130Q9H0E3 1048 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 RERGLQ9H628 205 aa14.97□□□□□ -0.01
RTN3-205ENST00000356000 A0A1B0GV90 55 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 STK25O00506 426 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 UBE2CO00762 179 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 ICAM1P05362 532 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 CD63P08962 238 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 PTPN6P29350 595 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 GEMP55040 296 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 RBMS2Q15434 407 aaKnown RBP14.96□□□□□ -0.01
RTN3-205ENST00000356000 FAM187BQ17R55 369 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 VMACQ2NL98 169 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 RNF212Q495C1 297 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 OR2B11Q5JQS5 317 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 PRAMEF13Q5VWM6 474 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 QSOX2Q6ZRP7 698 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 TMEM17Q86X19 198 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 ZFP82Q8N141 532 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 ACER1Q8TDN7 264 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 GSTK1Q9Y2Q3 226 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 YARS2Q9Y2Z4 477 aaKnown RBP14.96□□□□□ -0.01
RTN3-205ENST00000356000 SNX11Q9Y5W9 270 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 SYNJ2BP-COX16A0A087WUM0 186 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 RAD1O60671 282 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 ENTPD6O75354 484 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 RECKO95980 971 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 CXCL8P10145 99 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 HOXB8P17481 243 aaPredicted RBP14.96□□□□□ -0.01
RTN3-205ENST00000356000 S100A11P31949 105 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 RABGGTBP53611 331 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 SLC14A1Q13336 389 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 GK2Q14410 553 aaPredicted RBP14.96□□□□□ -0.01
RTN3-205ENST00000356000 SYTL3Q4VX76 610 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 NBPF12Q5TAG4 269 aaPredicted RBP14.96□□□□□ -0.01
RTN3-205ENST00000356000 ALKBH2Q6NS38 261 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 ZNF687Q8N1G0 1237 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 METTL6Q8TCB7 284 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 TMEM41AQ96HV5 264 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 CDK15Q96Q40 435 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 OR6C2Q9NZP2 312 aa14.96□□□□□ -0.01
RTN3-205ENST00000356000 COX16Q9P0S2 106 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms