RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 IFT20Q8IY31 132 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 ST13P4Q8IZP2 240 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 METTL4Q8N3J2 472 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 KCNA7Q96RP8 456 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 SERPINI1Q99574 410 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 TTTY12Q9BZ98 90 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 TIMMDC1Q9NPL8 285 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 MS4A12Q9NXJ0 267 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 TUBA8Q9NY65 449 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 TNFRSF10DQ9UBN6 386 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 TBK1Q9UHD2 729 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 CES1P1Q9UKY3 287 aa15.45■□□□□ 0.06
PDLIM7-201ENST00000355572 KLRC4-KLRK1H3BQV0 150 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 GLSO94925 669 aaPredicted RBP15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 PYGBP11216 843 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 ABOP16442 354 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 BUD31P41223 144 aaPredicted RBP15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 PHEXP78562 749 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 CLCQ05315 142 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 NDUFAF5Q5TEU4 345 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 TTC19Q6DKK2 380 aaPredicted RBP15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 CD163Q86VB7 1156 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 ZNF808Q8N4W9 903 aaPredicted RBP15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 TMEM251Q8N6I4 163 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 ZNF441Q8N8Z8 693 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 POGLUT1Q8NBL1 392 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 NUBPLQ8TB37 319 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 CENPKQ9BS16 269 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 WWTR1Q9GZV5 400 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 TNFRSF12AQ9NP84 129 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 TMCO1Q9UM00 188 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 SLC12A4Q9UP95 1085 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 DTX4Q9Y2E6 619 aa15.44■□□□□ 0.06
PDLIM7-201ENST00000355572 UBFD1O14562 309 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 RFPL3SP0C7P2 107 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 S1PR1P21453 382 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 MAGEA5P43359 124 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 RAE1P78406 368 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 MGAT2Q10469 447 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 ART3Q13508 389 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 MPEG1Q2M385 716 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 PRAMEF20Q5VT98 475 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 DESI1Q6ICB0 168 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 RTL4Q6ZR62 310 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 LURAP1LQ8IV03 231 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 GPALPP1Q8IXQ4 340 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 CDYL2Q8N8U2 506 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 FAM57AQ8TBR7 257 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 SELENOMQ8WWX9 145 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 TM4SF18Q96CE8 201 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 RBM18Q96H35 190 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 GAL3ST4Q96RP7 486 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 ZDHHC11Q9H8X9 412 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 CXorf21Q9HAI6 301 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 HEY2Q9UBP5 337 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 SUCOQ9UBS9 1254 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 COPS7AQ9UBW8 275 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 TRPS1Q9UHF7 1281 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 ENTPD4Q9Y227 616 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 CHCHD2Q9Y6H1 151 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 TEX15Q9BXT5 2789 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 FBN2P35556 2912 aa15.43■□□□□ 0.06
PDLIM7-201ENST00000355572 SYNDIG1LA6NDD5 238 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 LRRC3CA6NJW4 275 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 G3V2L1 256 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 MANBAO00462 879 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 NME6O75414 186 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 SUPT7LO94864 414 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 TPOP07202 933 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 SNRPB2P08579 225 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 SLC35E2P0CK97 266 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 COX7A2P14406 83 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 ENDOUP21128 410 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 CNR1P21554 472 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 TLX1P31314 330 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 FOXA1P55317 472 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 PPIAP62937 165 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 IFT88Q13099 833 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 PRSS53Q2L4Q9 553 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 CCNYL2Q5T2Q4 361 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 BICRALQ6AI39 1079 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 OR52E8Q6IFG1 317 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 FAM111BQ6SJ93 734 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 SCIMPQ6UWF3 145 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 BNC2Q6ZN30 1099 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 C1orf52Q8N6N3 182 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 ZNF615Q8N8J6 731 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 OR10G3Q8NGC4 313 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 OR5L2Q8NGL0 311 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 RIT1Q92963 219 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 MARVELD3Q96A59 401 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 SPACA9Q96E40 222 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 GSTO2Q9H4Y5 243 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 ELOVL6Q9H5J4 265 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 TIMM22Q9Y584 194 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 PCDHA9Q9Y5H5 950 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 PKDREJQ9NTG1 2253 aa15.42■□□□□ 0.06
PDLIM7-201ENST00000355572 OR10H2O60403 315 aa15.41■□□□□ 0.06
PDLIM7-201ENST00000355572 OTCP00480 354 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms