RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 TRPC4Q9UBN4 977 aa24.21■■□□□ 1.47
CLK2-201ENST00000355560 BCAT2O15382 392 aaPredicted RBP24.2■■□□□ 1.47
CLK2-201ENST00000355560 PGM3O95394 542 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 PROS1P07225 676 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 MATN1P21941 496 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 TLX1P31314 330 aaPredicted RBP24.2■■□□□ 1.47
CLK2-201ENST00000355560 MC3RP41968 323 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 SIM1P81133 766 aaPredicted RBP24.2■■□□□ 1.47
CLK2-201ENST00000355560 TSEN54Q7Z6J9 526 aaKnown RBP24.2■■□□□ 1.47
CLK2-201ENST00000355560 GABARAPL1Q9H0R8 117 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 DUSP15Q9H1R2 295 aaPredicted RBP24.2■■□□□ 1.47
CLK2-201ENST00000355560 P2RX2Q9UBL9 471 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 MYRFQ9Y2G1 1151 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 SLC22A7Q9Y694 548 aa24.2■■□□□ 1.47
CLK2-201ENST00000355560 TMEM131Q92545 1883 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 SLC9B1P1A6NJY1 282 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 SEC24DO94855 1032 aaPredicted RBP24.2■■□□□ 1.46
CLK2-201ENST00000355560 FHP07954 510 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 RXRGP48443 463 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 AFF3P51826 1226 aaKnown RBP24.2■■□□□ 1.46
CLK2-201ENST00000355560 PRR5P85299 388 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 EPS8Q12929 822 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 LASP1Q14847 261 aaKnown RBP24.2■■□□□ 1.46
CLK2-201ENST00000355560 MAPK11Q15759 364 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 C17orf82Q86X59 251 aaPredicted RBP24.2■■□□□ 1.46
CLK2-201ENST00000355560 OR56A1Q8NGH5 318 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 XAGE5Q8WWM1 108 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 MOAP1Q96BY2 351 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 C3orf18Q9UK00 162 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 NAALAD2Q9Y3Q0 740 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 LAMA1P25391 3075 aa24.2■■□□□ 1.46
CLK2-201ENST00000355560 TMEM247A6NEH6 219 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 DPM1O60762 260 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 HMGN2P05204 90 aaKnown RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 PPM1FP49593 454 aaPredicted RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 KHKP50053 298 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 LTB4RQ15722 352 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 ARMC8Q8IUR7 673 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 GEMIN6Q8WXD5 167 aaKnown RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 OTUB1Q96FW1 271 aaPredicted RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 MAP3K3Q99759 626 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 LYRM4Q9HD34 91 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 SH3GLB1Q9Y371 365 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 H3BNH8 94 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 SLC28A2O43868 658 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 PIAS2O75928 621 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 RRM2P31350 389 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 SIM2Q14190 667 aaPredicted RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 WDR45BQ5MNZ6 344 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 RNF220Q5VTB9 566 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 TSSK4Q6SA08 328 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 FAM92BQ6ZTR7 304 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 LRRC25Q8N386 305 aaPredicted RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 MAFAQ8NHW3 353 aaPredicted RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 ELP4Q96EB1 424 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 MBOAT4Q96T53 435 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 YIPF4Q9BSR8 244 aa24.19■■□□□ 1.46
CLK2-201ENST00000355560 TMEFF2Q9UIK5 374 aaPredicted RBP24.19■■□□□ 1.46
CLK2-201ENST00000355560 CACNA1IQ9P0X4 2223 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 THADAQ6YHU6 1953 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 CCDC88CQ9P219 2028 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 PRAMEF25A6NGN4 478 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 GALR3O60755 368 aaPredicted RBP24.18■■□□□ 1.46
CLK2-201ENST00000355560 LINGO3P0C6S8 592 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 ATP6V1B1P15313 513 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 SYPL1Q16563 259 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 DUSP7Q16829 419 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 TTC33Q6PID6 262 aaPredicted RBP24.18■■□□□ 1.46
CLK2-201ENST00000355560 ZNF786Q8N393 782 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 SDR16C5Q8N3Y7 309 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 OR4K14Q8NGD5 310 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 OR5T3Q8NGG3 340 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 MRPS26Q9BYN8 205 aaKnown RBP24.18■■□□□ 1.46
CLK2-201ENST00000355560 ANKRA2Q9H9E1 313 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 PDP1Q9P0J1 537 aaPredicted RBP24.18■■□□□ 1.46
CLK2-201ENST00000355560 ORC6Q9Y5N6 252 aa24.18■■□□□ 1.46
CLK2-201ENST00000355560 PRAMEF27A3QJZ7 478 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 EMC8O43402 210 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 PDE9AO76083 593 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 CLPTM1O96005 669 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 CTSBP07858 339 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 IGFBP5P24593 272 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 XKP51811 444 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 C14orf28Q4W4Y0 310 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 OR4N5Q8IXE1 308 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 SAMD14Q8IZD0 417 aaPredicted RBP24.17■■□□□ 1.46
CLK2-201ENST00000355560 KAT2AQ92830 837 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 COL26A1Q96A83 441 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 NRBF2Q96F24 287 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 MUS81Q96NY9 551 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 TREX2Q9BQ50 279 aaPredicted RBP24.17■■□□□ 1.46
CLK2-201ENST00000355560 AMBRA1Q9C0C7 1298 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 C3orf14Q9HBI5 128 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 THSD1Q9NS62 852 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 FAM118AQ9NWS6 357 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 TESMINQ9Y4I5 508 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 SPACA6W5XKT8 324 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 SCN2AQ99250 2005 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 PIGAP37287 484 aa24.17■■□□□ 1.46
CLK2-201ENST00000355560 ANXA11P50995 505 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms