RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 LRRC46Q96FV0 321 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 TRIB3Q96RU7 358 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF442Q9H7R0 627 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 PAQR5Q9NXK6 330 aaPredicted RBP14.27□□□□□ -0.13
LMX1B-201ENST00000355497 REV1Q9UBZ9 1251 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 CD9P21926 228 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 HTR1EP28566 365 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 PLCXD2Q0VAA5 305 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 NFE2L1Q14494 772 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 RAB11BQ15907 218 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 NTRK2Q16620 822 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ZNF423Q2M1K9 1284 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ZFAND4Q86XD8 727 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 KLBQ86Z14 1044 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 SCML4Q8N228 414 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 KRTCAP2Q8N6L1 136 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 GLYATL2Q8WU03 294 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 SLC35F5Q8WV83 523 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 FAM83CQ9BQN1 747 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 FBRSL1Q9HCM7 1045 aaKnown RBP14.26□□□□□ -0.13
LMX1B-201ENST00000355497 TFPTP0C1Z6 253 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ACVR1BP36896 505 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 PRMT2P55345 433 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 MFSD13AQ14CX5 517 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 BCL2A1Q16548 175 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 C6orf136Q5SQH8 315 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 CNKSR3Q6P9H4 555 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ZDHHC1Q8WTX9 485 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 NAA11Q9BSU3 229 aaPredicted RBP14.26□□□□□ -0.13
LMX1B-201ENST00000355497 UNKLQ9H9P5 680 aaKnown RBP14.26□□□□□ -0.13
LMX1B-201ENST00000355497 SLC22A31A6NKX4 558 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 SOBPA7XYQ1 873 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 FGF3P11487 239 aaPredicted RBP14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ADRB3P13945 408 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 PRKXP51817 358 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ART1P52961 327 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 UBE2UQ5VVX9 321 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 CES4AQ5XG92 561 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 FAM205BPQ63HN1 556 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ARHGAP11AQ6P4F7 1023 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ALDH16A1Q8IZ83 802 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ZDHHC12Q96GR4 267 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 TWNKQ96RR1 684 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 MST1RQ04912 1400 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 INPPL1O15357 1258 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 PLATP00750 562 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 GRPRP30550 384 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 KCNC1P48547 511 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 GABARAPL2P60520 117 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 FOXK1P85037 733 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 LRFN4Q6PJG9 635 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 DEFB119Q8N690 84 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 TXNDC5Q8NBS9 432 aaKnown RBP14.26□□□□□ -0.13
LMX1B-201ENST00000355497 FBXL18Q96ME1 805 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ARHGAP9Q9BRR9 750 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 HRASLS2Q9NWW9 162 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 B4GALT6Q9UBX8 382 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 BAZ2BQ9UIF8 2168 aaKnown RBP14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ARVCFO00192 962 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 C1GALT1C1LP0DN25 315 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 FBLP22087 321 aaKnown RBP14.26□□□□□ -0.13
LMX1B-201ENST00000355497 HRH2P25021 359 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 PXKQ7Z7A4 578 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 TSPAN33Q86UF1 283 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 MALSU1Q96EH3 234 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 SGTBQ96EQ0 304 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 OR1F2PQ96R84 312 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 LIPT1Q9Y234 373 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 ADAM18Q9Y3Q7 739 aa14.26□□□□□ -0.13
LMX1B-201ENST00000355497 GGT2P36268 569 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 LEPRP48357 1165 aaKnown RBP14.25□□□□□ -0.13
LMX1B-201ENST00000355497 TLE3Q04726 772 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 SNTB2Q13425 540 aaKnown RBP14.25□□□□□ -0.13
LMX1B-201ENST00000355497 TRIM46Q7Z4K8 759 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 FTMTQ8N4E7 242 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 CCDC32Q9BV29 185 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 SRA1Q9HD15 236 aaKnown RBP14.25□□□□□ -0.13
LMX1B-201ENST00000355497 MRPL15Q9P015 296 aaKnown RBP14.25□□□□□ -0.13
LMX1B-201ENST00000355497 B4GALT7Q9UBV7 327 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 PCDHGA6Q9Y5G7 932 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 LEFTY2O00292 366 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 EEDO75530 441 aaKnown RBP14.25□□□□□ -0.13
LMX1B-201ENST00000355497 MAS1P04201 325 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 IRF2P14316 349 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 TIA1P31483 386 aaKnown RBP eCLIP14.25□□□□□ -0.13
LMX1B-201ENST00000355497 THBS2P35442 1172 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 CDKN2CP42773 168 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 GCGRP47871 477 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 OGDHQ02218 1023 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 NIPAL4Q0D2K0 466 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 ELOCQ15369 112 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 COMMD7Q86VX2 200 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 OR52P1PQ8NH57 321 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 OR51A7Q8NH64 312 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 ASB15Q8WXK1 588 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 STRADBQ9C0K7 418 aa14.25□□□□□ -0.13
LMX1B-201ENST00000355497 PPIL3Q9H2H8 161 aaKnown RBP14.25□□□□□ -0.13
LMX1B-201ENST00000355497 FOLH1BQ9HBA9 442 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms