RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SNX25Q9H3E2 840 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 PRR13Q9NZ81 148 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 USP36Q9P275 1121 aaKnown RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 SUCOQ9UBS9 1254 aaKnown RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 PCDHGA5Q9Y5G8 931 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 LYVE1Q9Y5Y7 322 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 MEGF8Q7Z7M0 2845 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SYNDIG1LA6NDD5 238 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SUPT3HB4E1H0 165 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 PRKYO43930 277 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 KLK8O60259 260 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 HSMCR30P0CW71 290 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 PVRP15151 417 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 ARL1P40616 181 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 MAGEA11P43364 429 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 POLR2JP52435 117 aaKnown RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 SLC7A9P82251 487 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 CLCA4Q14CN2 919 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 ZRANB3Q5FWF4 1079 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 CLEC12AQ5QGZ9 265 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 CRTC3Q6UUV7 619 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SYT13Q7L8C5 426 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 PAGE2Q7Z2X7 111 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 DNAJB7Q7Z6W7 309 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 SPATS2Q86XZ4 545 aaKnown RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 SCML4Q8N228 414 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SUN3Q8TAQ9 357 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 CHPT1Q8WUD6 406 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 FBLIM1Q8WUP2 373 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SMARCD2Q92925 531 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 CMTM5Q96DZ9 223 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 L3HYPDHQ96EM0 354 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 F2RL3Q96RI0 385 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 HEBP1Q9NRV9 189 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 DCAF13Q9NV06 445 aaKnown RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 COMMD8Q9NX08 183 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 LIMS3P0CW19 117 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 LIMS4P0CW20 117 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 VASPP50552 380 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 PHEXP78562 749 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 EFNB1P98172 346 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 ERV3-1Q14264 604 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SHBQ15464 509 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 TTC33Q6PID6 262 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 PARP16Q8N5Y8 322 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 OR4D10Q8NGI6 311 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 OR5H6Q8NGV6 325 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 C3orf49Q96BT1 292 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 MRGPRX3Q96LB0 322 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 OPALINQ96PE5 141 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 DCDC2Q9UHG0 476 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 ZNF221Q9UK13 617 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SNX7Q9UNH6 387 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 HOXC11O43248 304 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 CRCPO75575 148 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 RASAL1O95294 804 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 ZNF682O95780 498 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SLC2A4P14672 509 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 AK4P27144 223 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 PBLDP30039 288 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 SSTR2P30874 369 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 SERPINB8P50452 374 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 IRX1P78414 480 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 FABP5Q01469 135 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 PRKAA1Q13131 559 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 ATP6AP1LQ52LC2 224 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 KDM4DQ6B0I6 523 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 TCF24Q7RTU0 167 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 ATPAF2Q8N5M1 289 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 TPD52L3Q96J77 140 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 MRPL57Q9BQC6 102 aaKnown RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 CEP44Q9C0F1 390 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 BRD9Q9H8M2 597 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 PLEKHB1Q9UF11 243 aaPredicted RBP5.28□□□□□ -1.56
CD47-201ENST00000355354 YIPF1Q9Y548 306 aa5.28□□□□□ -1.56
CD47-201ENST00000355354 LOC100130705A0A1B0GUX0 176 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 HEATR9A2RTY3 570 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 PLPP1O14494 284 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 MSTNO14793 375 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 CST1P01037 141 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 CD40LGP29965 261 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 TTKP33981 857 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 HMGCLP35914 325 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 CRYBB2P43320 205 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 KIR3DL1P43629 444 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 TAP2Q03519 686 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 DUSP8Q13202 625 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 ZRSR2Q15696 482 aaKnown RBP5.27□□□□□ -1.57
CD47-201ENST00000355354 PLK5Q496M5 336 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 CRTC2Q53ET0 693 aaPredicted RBP5.27□□□□□ -1.57
CD47-201ENST00000355354 FAM53AQ6NSI3 398 aaPredicted RBP5.27□□□□□ -1.57
CD47-201ENST00000355354 SLC23A3Q6PIS1 610 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 FAM92BQ6ZTR7 304 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 SERPINA12Q8IW75 414 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 CLYBLQ8N0X4 340 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 C1orf52Q8N6N3 182 aaKnown RBP5.27□□□□□ -1.57
CD47-201ENST00000355354 TOP6BLQ8N6T0 577 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 LRRC39Q96DD0 335 aa5.27□□□□□ -1.57
CD47-201ENST00000355354 ZMAT3Q9HA38 289 aaKnown RBP5.27□□□□□ -1.57
CD47-201ENST00000355354 TCF7L1Q9HCS4 588 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms