RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 OR5AK3PQ8NH89 298 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 WDR48Q8TAF3 677 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 HCAR2Q8TDS4 363 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SETD7Q8WTS6 366 aaKnown RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SLC38A5Q8WUX1 472 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 DEDD2Q8WXF8 326 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF582Q96NG8 517 aaPredicted RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 KCNJ15Q99712 375 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 AHSPQ9NZD4 102 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ADAM30Q9UKF2 790 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 MAFFQ9ULX9 164 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SATB2Q9UPW6 733 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SPIN1Q9Y657 262 aaPredicted RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 LINC00854A0A1B0GVQ3 168 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 CLEC2LP0C7M8 214 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 CCNYL3P0C7X3 344 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 RPL17P18621 184 aaKnown RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 HTR2BP41595 481 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 GIPRP48546 466 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 EVX1P49640 407 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ATN1P54259 1190 aaPredicted RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 BTG1P62324 171 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 UBE3AQ05086 875 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 MXD1Q05195 221 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ACSM1Q08AH1 577 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 IKZF1Q13422 519 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ANGPT1Q15389 498 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ENTPD8Q5MY95 495 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ATAT1Q5SQI0 421 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 GDPD4Q6W3E5 623 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 FAM109AQ8N4B1 249 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 CAMKK1Q8N5S9 505 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 SLC43A3Q8NBI5 491 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TMEM43Q9BTV4 400 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 SLC6A16Q9GZN6 736 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 CXorf36Q9H7Y0 433 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 NT5DC2Q9H857 520 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 NEUROD4Q9HD90 331 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TVP23BQ9NYZ1 205 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 NDRG2Q9UN36 371 aaKnown RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ALG5Q9Y673 324 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 GRM6O15303 877 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 PRODHO43272 600 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TLX2O43763 284 aaPredicted RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 PRKYO43930 277 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 C1orf105O95561 183 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 SELPP16109 830 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 BDKRB1P46663 353 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 OR3A3P47888 321 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 SMSP52788 366 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 EPHB3P54753 998 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 CNTN1Q12860 1018 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 MAB21L1Q13394 359 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 PRSS53Q2L4Q9 553 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TMEM44Q2T9K0 475 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 CCSMST1Q4G0I0 132 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 HENMT1Q5T8I9 393 aaKnown RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 C1orf94Q6P1W5 598 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 NXPE4Q6UWF7 544 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 PRICKLE2Q7Z3G6 844 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TRIM48Q8IWZ4 208 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 CADM2Q8N3J6 435 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 Q8N402 240 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ARL14EPQ8N8R7 260 aaPredicted RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 SUN5Q8TC36 379 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 ZNF480Q8WV37 535 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 NR4A3Q92570 626 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 C1GALT1C1Q96EU7 318 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TMEM19Q96HH6 336 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 SLC22A12Q96S37 553 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 MKRN2Q9H000 416 aaKnown RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TOR4AQ9NXH8 423 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 B3GNT2Q9NY97 397 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 TAAR2Q9P1P5 351 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 SLC25A13Q9UJS0 675 aa10.83□□□□□ -0.68
CAPN9-202ENST00000354537 NUP214P35658 2090 aaPredicted RBP10.83□□□□□ -0.68
CAPN9-202ENST00000354537 A0A0G2JMP0 313 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 PRR23AA6NEV1 266 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 FAM227AF5H4B4 570 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 LYRM1O43325 122 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 TSPAN6O43657 245 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 SLC19A2O60779 497 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 CPNE3O75131 537 aaKnown RBP10.82□□□□□ -0.68
CAPN9-202ENST00000354537 SEMA7AO75326 666 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 SH3BGRLO75368 114 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 MTX2O75431 263 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 SOX14O95416 240 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 CSF2P04141 144 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 FEN1P39748 380 aaKnown RBP10.82□□□□□ -0.68
CAPN9-202ENST00000354537 TGM4P49221 684 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 MAN2A2P49641 1150 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 RRAS2P62070 204 aaPredicted RBP10.82□□□□□ -0.68
CAPN9-202ENST00000354537 TBPL1P62380 186 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 GPLD1P80108 840 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 SLC7A9P82251 487 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 DSG2Q14126 1118 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 GINS1Q14691 196 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 MINDY4Q4G0A6 757 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 FLYWCH1Q4VC44 716 aa10.82□□□□□ -0.68
CAPN9-202ENST00000354537 CRTC2Q53ET0 693 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms