RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 SFT2D3Q587I9 215 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 CES4AQ5XG92 561 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 DPY19L2P1Q6NXN4 242 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ATG14Q6ZNE5 492 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 CNDP2Q96KP4 475 aaKnown RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 CHMP1AQ9HD42 196 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-201ENST00000353479 OBP2AQ9NY56 170 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 TAS2R7Q9NYW3 318 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 EMCNQ9ULC0 261 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF451Q9Y4E5 1061 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 SESN1Q9Y6P5 492 aa14.2□□□□□ -0.14
COL17A1-201ENST00000353479 PDCD5O14737 125 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 F3P13726 295 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 TXNL4AP83876 142 aaKnown RBP14.19□□□□□ -0.14
COL17A1-201ENST00000353479 ARHGAP19Q14CB8 494 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 GTDC1Q4AE62 458 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 LMNTD1Q8N9Z9 388 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 SLC22A8Q8TCC7 542 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 NXPE3Q969Y0 559 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 EHD1Q9H4M9 534 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 DOCK1Q14185 1865 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 H3BSH0 61 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 TOR1BO14657 336 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 CLIC3O95833 236 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 GINS1Q14691 196 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 CCDC92Q53HC0 331 aaPredicted RBP14.19□□□□□ -0.14
COL17A1-201ENST00000353479 FATE1Q969F0 183 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 TMEM19Q96HH6 336 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 RBP7Q96R05 134 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 INSM2Q96T92 566 aaPredicted RBP14.19□□□□□ -0.14
COL17A1-201ENST00000353479 TMEM30AQ9NV96 361 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 LRIT1Q9P2V4 623 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 TPD52L2O43399 206 aaKnown RBP14.19□□□□□ -0.14
COL17A1-201ENST00000353479 ACSL1P33121 698 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 CSNK1EP49674 416 aaKnown RBP14.19□□□□□ -0.14
COL17A1-201ENST00000353479 OR12D2P58182 307 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF765Q7L2R6 523 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 C7orf57Q8NEG2 295 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 OR51A7Q8NH64 312 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 SORT1Q99523 831 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 ALOXE3Q9BYJ1 711 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 OR6C2Q9NZP2 312 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 KLHL42Q9P2K6 505 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 MYO18AQ92614 2054 aaKnown RBP14.19□□□□□ -0.14
COL17A1-201ENST00000353479 GFRA2O00451 464 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 CTHP32929 405 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 ZNF33BQ06732 778 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 SLC3A1Q07837 685 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 TCEAL6Q6IPX3 200 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 SHQ1Q6PI26 577 aaKnown RBP14.19□□□□□ -0.14
COL17A1-201ENST00000353479 HACD2Q6Y1H2 254 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 OR2L5Q8NG80 312 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 RAB2BQ8WUD1 216 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 DSN1Q9H410 356 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 COMMD3Q9UBI1 195 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 CLEC4EQ9ULY5 219 aa14.19□□□□□ -0.14
COL17A1-201ENST00000353479 FAM240BA0A1B0GVZ2 78 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 HYKKA2RU49 373 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 TBX1O43435 398 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 AK1P00568 194 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 CAPN3P20807 821 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 PDX1P52945 283 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 RPE65Q16518 533 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 ODF4Q2M2E3 257 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 UTS2BQ765I0 119 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 PDPRQ8NCN5 879 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 CRELD1Q96HD1 420 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 PCDH10Q9P2E7 1040 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 GNG8Q9UK08 70 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 PRODHO43272 600 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 CLEC3AO75596 197 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 GCAP28676 217 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 SWT1Q5T5J6 900 aaKnown RBP14.18□□□□□ -0.14
COL17A1-201ENST00000353479 USP43Q70EL4 1123 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 ATOH8Q96SQ7 321 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 MND1Q9BWT6 205 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 TTTY10Q9BZA0 68 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 KCNK13Q9HB14 408 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 FAM53CQ9NYF3 392 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 MALT1Q9UDY8 824 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 FAAHO00519 579 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 METTL2BQ6P1Q9 378 aaKnown RBP14.18□□□□□ -0.14
COL17A1-201ENST00000353479 PDSS2Q86YH6 399 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 MCATQ8IVS2 390 aaKnown RBP14.18□□□□□ -0.14
COL17A1-201ENST00000353479 LRRC17Q8N6Y2 441 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 OR52N2Q8NGI0 321 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 LKAAEAR1Q8TD35 194 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 HTRA1Q92743 480 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 PHF12Q96QT6 1004 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 TMED9Q9BVK6 235 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 TMEM168Q9H0V1 697 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 CCM2LQ9NUG4 571 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-201ENST00000353479 SARDHQ9UL12 918 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 GON4LQ3T8J9 2241 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 LARP4Q71RC2 724 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL17A1-201ENST00000353479 OR9A2Q8NGT5 310 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 SETD6Q8TBK2 473 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 NTMT1Q9BV86 223 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 ACPTQ9BZG2 426 aa14.18□□□□□ -0.14
COL17A1-201ENST00000353479 NME7Q9Y5B8 376 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms