RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 SLC22A4Q9H015 551 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 SOX17Q9H6I2 414 aaPredicted RBP12.89□□□□□ -0.35
LMBR1-201ENST00000353442 DTLQ9NZJ0 730 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 LMAN2Q12907 356 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 MS4A13Q5J8X5 152 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 METTL2BQ6P1Q9 378 aaKnown RBP12.89□□□□□ -0.35
LMBR1-201ENST00000353442 LEG1Q6P5S2 330 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.89□□□□□ -0.35
LMBR1-201ENST00000353442 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
LMBR1-201ENST00000353442 OR56A3Q8NH54 315 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 FRZBQ92765 325 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
LMBR1-201ENST00000353442 MUC13Q9H3R2 512 aa12.89□□□□□ -0.35
LMBR1-201ENST00000353442 A6NHS1 94 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 COCHO43405 550 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ERVK-8P63133 956 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 RUNX3Q13761 415 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 OR5M10Q6IEU7 315 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 TRMT10BQ6PF06 316 aaKnown RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 SYT14Q8NB59 555 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 C12orf43Q96C57 262 aaKnown RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF845Q96IR2 970 aaPredicted RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 DPH7Q9BTV6 452 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ST6GALNAC5Q9BVH7 336 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 EI24O14681 340 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 DNAJA2O60884 412 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 CEP152O94986 1710 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 KNG1P01042 644 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ANXA8P13928 327 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 PTGS2P35354 604 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 NTHL1P78549 312 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 PAN3Q58A45 887 aaKnown RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 TMEM53Q6P2H8 277 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ARRDC3Q96B67 414 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 BSCL2Q96G97 398 aaPredicted RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 FOXN4Q96NZ1 517 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 TPPP3Q9BW30 176 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 KCNK12Q9HB15 430 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ARNT2Q9HBZ2 717 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ANKRD33BA6NCL7 494 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 SGCEO43556 437 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 EDF1O60869 148 aaKnown RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ATP6V1G1O75348 118 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ASPAP45381 313 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 RPS26P62854 115 aaKnown RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ARL16Q0P5N6 197 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 NFATC4Q14934 902 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 OSTF1Q92882 214 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 MUCL1Q96DR8 90 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 HSH2DQ96JZ2 352 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 MTMR11A4FU01 709 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 UNC119BA6NIH7 251 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 GJE1A6NN92 205 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 LPAR4Q99677 370 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 CD8B2A6NJW9 211 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 B4GAT1O43505 415 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 XPNPEP2O43895 674 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 LILRB3O75022 631 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF217O75362 1048 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 PRLP01236 227 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 CD8BP10966 210 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 SIM1P81133 766 aaPredicted RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 RNF175Q8N4F7 328 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 SCCPDHQ8NBX0 429 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 SAMD11Q96NU1 681 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 TLL2Q9Y6L7 1015 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 TTLL8A6PVC2 850 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 CST6Q15828 149 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 KCTD18Q6PI47 426 aaPredicted RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF619Q8N2I2 560 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ALG3Q92685 438 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 C8orf33Q9H7E9 229 aaPredicted RBP12.88□□□□□ -0.35
LMBR1-201ENST00000353442 TMEM184CQ9NVA4 438 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 ACSL5Q9ULC5 683 aa12.88□□□□□ -0.35
LMBR1-201ENST00000353442 SAGE2PA6NJ88 616 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 GPR4P46093 362 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 MEX3BQ6ZN04 569 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 LARP4Q71RC2 724 aaKnown RBP eCLIP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 RPF2Q9H7B2 306 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 MCTS1Q9ULC4 181 aaKnown RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 C2orf78A6NCI8 922 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 PEX2P28328 305 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 AGTR2P50052 363 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 GOLM1Q8NBJ4 401 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 OR52E2Q8NGJ4 325 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF431Q8TF32 576 aaPredicted RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 PPP1R11O60927 126 aaPredicted RBP12.87□□□□□ -0.35
LMBR1-201ENST00000353442 WDPCPO95876 746 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 CHRM4P08173 479 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 NTSR1P30989 418 aa12.87□□□□□ -0.35
LMBR1-201ENST00000353442 HOXA10P31260 410 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms