RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 UTS2BQ765I0 119 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 RD3Q7Z3Z2 195 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 THOC6Q86W42 341 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 STX19Q8N4C7 294 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TMEM145Q8NBT3 493 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 KBTBD8Q8NFY9 601 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 OR56A3Q8NH54 315 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 UTP15Q8TED0 518 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 CAPSLQ8WWF8 208 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TFGQ92734 400 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 SCARF2Q96GP6 870 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 COL21A1Q96P44 957 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 SDHCQ99643 169 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 GPR174Q9BXC1 333 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 DPEP2Q9H4A9 486 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PHPT1Q9NRX4 125 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 SPATA6Q9NWH7 488 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 WNT16Q9UBV4 365 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MN1Q10571 1320 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PRSS38A1L453 326 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 C19orf67A6NJJ6 358 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 FAM47E-STBD1D6RA91 191 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ADAMDEC1O15204 470 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MED26O95402 600 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PDGFBP01127 241 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 DCNP07585 359 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 POU2F1P14859 743 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 NPPBP16860 134 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 DGKEP52429 567 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 CDH12P55289 794 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 RAE1P78406 368 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TAP2Q03519 686 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ACSM2AQ08AH3 577 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 CSTF3Q12996 717 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 HKDC1Q2TB90 917 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 CYP27C1Q4G0S4 372 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF542PQ5EBM4 170 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 XKR6Q5GH73 641 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 COX20Q5RI15 118 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 CPTPQ5TA50 214 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ACSM2BQ68CK6 577 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ENPP7Q6UWV6 458 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF605Q86T29 641 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 B3GNT7Q8NFL0 401 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 IL17RDQ8NFM7 739 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 OR13H1Q8NG92 308 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 OR9Q2Q8NGE9 314 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 OR4C15Q8NGM1 316 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MAFAQ8NHW3 353 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 NEIL2Q969S2 332 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF486Q96H40 463 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 OR5M11Q96RB7 305 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 OSGEPL1Q9H4B0 414 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MS4A12Q9NXJ0 267 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 EHD3Q9NZN3 535 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MUTYHQ9UIF7 546 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 RUVBL1Q9Y265 456 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ASF1AQ9Y294 204 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 GPSM3Q9Y4H4 160 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PCDH15Q96QU1 1955 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 IGHV1OR15-9A0A0B4J2B8 117 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 J3KTA2 159 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 CTDSP2O14595 271 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 KIAA0513O60268 411 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 CATP04040 527 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ABCB1P08183 1280 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 HNRNPA2B1P22626 353 aaKnown RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 S100A1P23297 94 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MAOBP27338 520 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PCGF2P35227 344 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MVDP53602 400 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 C21orf58P58505 322 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TBPL1P62380 186 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MEF2AQ02078 507 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 DMWDQ09019 674 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 IRF3Q14653 427 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MICAQ29983 383 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 EXOC3L2Q2M3D2 409 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 LIPJQ5W064 366 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ANGPTL8Q6UXH0 198 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 LGI4Q8N135 537 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 C11orf65Q8NCR3 313 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PSD4Q8NDX1 1056 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 DENND6BQ8NEG7 585 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 JPH3Q8WXH2 748 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 ASB12Q8WXK4 309 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MSANTD3Q96H12 275 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 SPATA9Q9BWV2 254 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TMEM168Q9H0V1 697 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TP63Q9H3D4 680 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TPK1Q9H3S4 243 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 NEK6Q9HC98 313 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 C14orf119Q9NWQ9 140 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 TBC1D29Q9UFV1 150 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 BTNL2Q9UIR0 455 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 FBXL21Q9UKT6 434 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 MKLN1Q9UL63 735 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 POFUT2Q9Y2G5 429 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 KLK4Q9Y5K2 254 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms