RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 GALNT4Q8N4A0 578 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 VPS37AQ8NEZ2 397 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 OR2L8Q8NGY9 312 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 FAM110BQ8TC76 370 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 TBC1D20Q96BZ9 403 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 SNRNP40Q96DI7 357 aaKnown RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 RDH12Q96NR8 316 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 PANX1Q96RD7 426 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 AIF1LQ9BQI0 150 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 INPP5KQ9BT40 448 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 APOOQ9BUR5 198 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 BDH2Q9BUT1 245 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 CHID1Q9BWS9 393 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 FAM192AQ9GZU8 254 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 SEMA6AQ9H2E6 1030 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 SPNS1Q9H2V7 528 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 REEP4Q9H6H4 257 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 RUBCNLQ9H714 662 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 DLL4Q9NR61 685 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 SLC6A13Q9NSD5 602 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 DCAF13Q9NV06 445 aaKnown RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 ATAD3AQ9NVI7 634 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ASF1BQ9NVP2 202 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 AHSPQ9NZD4 102 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 SPASTQ9UBP0 616 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ZNF282Q9UDV7 671 aaPredicted RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 APOBEC3BQ9UH17 382 aaKnown RBP7.77□□□□□ -1.17
CD44-205ENST00000352818 CIDEBQ9UHD4 219 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 ADAM29Q9UKF5 820 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 OR1A2Q9Y585 309 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 HEBP2Q9Y5Z4 205 aa7.77□□□□□ -1.17
CD44-205ENST00000352818 LRP4O75096 1905 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 IGHV5-10-1A0A0J9YXX1 117 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 GNG14A0A1W2PPG7 69 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 DPPA5A6NC42 116 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SAC3D1A6NKF1 404 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 GABRR3A8MPY1 467 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 CLIC1O00299 241 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 TNFRSF10CO14798 259 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 B4GAT1O43505 415 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 LRATO95237 230 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 PAK4O96013 591 aaPredicted RBP7.76□□□□□ -1.17
CD44-205ENST00000352818 FAM58BPP0C7Q3 252 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SMIM18P0DKX4 95 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 LAMP1P11279 417 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 ACP5P13686 325 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 PCGF2P35227 344 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 MAGEA2P43356 314 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 RAB28P51157 221 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 CCR8P51685 355 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 BIRC2Q13490 618 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 VEZF1Q14119 521 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 MYBPC3Q14896 1274 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 NFATC4Q14934 902 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 TCEA2Q15560 299 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 HKDC1Q2TB90 917 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 C6orf52Q5T4I8 152 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SLC6A19Q695T7 634 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 ADNP2Q6IQ32 1131 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 VN1R5Q7Z5H4 357 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SLC9B2Q86UD5 537 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 PHACTR4Q8IZ21 702 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SVOPLQ8N434 492 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 CBR4Q8N4T8 237 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 NATD1Q8N6N6 113 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 RBMXL3Q8N7X1 1067 aaKnown RBP7.76□□□□□ -1.17
CD44-205ENST00000352818 TTLQ8NG68 377 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 C16orf78Q8WTQ4 265 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 FIG4Q92562 907 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 TFAP2CQ92754 450 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 FAM162AQ96A26 154 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 MIEF2Q96C03 454 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SLC47A1Q96FL8 570 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 C12orf66Q96MD2 445 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 RNF145Q96MT1 663 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 QRFPRQ96P65 431 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 IL17FQ96PD4 163 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 TRAPPC9Q96Q05 1148 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 INSM2Q96T92 566 aaPredicted RBP7.76□□□□□ -1.17
CD44-205ENST00000352818 BARD1Q99728 777 aaKnown RBP7.76□□□□□ -1.17
CD44-205ENST00000352818 SLC29A1Q99808 456 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 NUDT22Q9BRQ3 303 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SARGQ9BW04 601 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 DDA1Q9BW61 102 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 MS4A8Q9BY19 250 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 TWSG1Q9GZX9 223 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 CHST8Q9H2A9 424 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 EPB41L1Q9H4G0 881 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 RAD21L1Q9H4I0 556 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 KIR3DX1Q9H7L2 352 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 OCIAD1Q9NX40 245 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 UBAP1Q9NZ09 502 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 TAC3Q9UHF0 121 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 RPS6KA6Q9UK32 745 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SUFUQ9UMX1 484 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 OAZ3Q9UMX2 235 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 SAMD4AQ9UPU9 718 aaKnown RBP7.76□□□□□ -1.17
CD44-205ENST00000352818 ICKQ9UPZ9 632 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 EXO1Q9UQ84 846 aaKnown RBP7.76□□□□□ -1.17
CD44-205ENST00000352818 RPH3AQ9Y2J0 694 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms