RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SSR2P43308 183 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 UGT2B15P54855 530 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 RUNX3Q13761 415 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 C12orf73Q69YU5 71 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 VITQ6UXI7 678 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 ZNF793Q6ZN11 406 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 DEF8Q6ZN54 512 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 CACUL1Q86Y37 369 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 UCN3Q969E3 161 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 CAMK1GQ96NX5 476 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 C17orf62Q9BQA9 187 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 RAB11FIP5Q9BXF6 653 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 OR51I1Q9H343 314 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 PRDM8Q9NQV8 689 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 CHCHD3Q9NX63 227 aaKnown RBP20.94■□□□□ 0.94
UPF3A-201ENST00000351487 STON1Q9Y6Q2 735 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 AGAP5A6NIR3 686 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 OR12D1P0DN82 309 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 POU1F1P28069 291 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 ENPP2Q13822 863 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 ZIC1Q15915 447 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 PGBD2Q6P3X8 592 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 GET4Q7L5D6 327 aaPredicted RBP20.94■□□□□ 0.94
UPF3A-201ENST00000351487 ADCK2Q7Z695 626 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 LACC1Q8IV20 430 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 TBC1D19Q8N5T2 526 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 OR2L8Q8NGY9 312 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 VANGL1Q8TAA9 524 aaPredicted RBP20.94■□□□□ 0.94
UPF3A-201ENST00000351487 CHFRQ96EP1 664 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 OR5M11Q96RB7 305 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 FAIM2Q9BWQ8 316 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 CDADC1Q9BWV3 514 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 C11orf16Q9NQ32 467 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 SLC35C2Q9NQQ7 365 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 PPM1DO15297 605 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 OR10H3O60404 316 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 CD72P21854 359 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 CRISP3P54108 245 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 SYPL1Q16563 259 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 TIMM50Q3ZCQ8 353 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 TANGO2Q6ICL3 276 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 RBM45Q8IUH3 476 aaKnown RBP20.93■□□□□ 0.94
UPF3A-201ENST00000351487 ITPKCQ96DU7 683 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 MGLLQ99685 303 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 CENPOQ9BU64 300 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 OSGEPL1Q9H4B0 414 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 PHPT1Q9NRX4 125 aaPredicted RBP20.93■□□□□ 0.94
UPF3A-201ENST00000351487 SERGEFQ9UGK8 458 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 A4GNTQ9UNA3 340 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 A0A0G2JN53 185 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 LOC100506127A0A0U1RQW1 187 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 DBTP11182 482 aaKnown RBP20.93■□□□□ 0.94
UPF3A-201ENST00000351487 PPP2R1BP30154 601 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 FOXD4Q12950 439 aaPredicted RBP20.93■□□□□ 0.94
UPF3A-201ENST00000351487 FGL2Q14314 439 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 TMEM64Q6YI46 380 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 ATCAYQ86WG3 371 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 KRT73Q86Y46 540 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 Q96MT0 163 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 WFDC6Q9BQY6 131 aa20.93■□□□□ 0.94
UPF3A-201ENST00000351487 ISPDA4D126 451 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 SAGE2PA6NJ88 616 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 PRR19A6NJB7 356 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 MAN2B1O00754 1011 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 UPK1BO75841 260 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 ADH1BP00325 375 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 HSMCR30P0CW71 290 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 C5AR1P21730 350 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 MEDAGQ5VYS4 303 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 OR5D16Q8NGK9 328 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 SLC7A13Q8TCU3 470 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 TAPBPLQ9BX59 468 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 BCL2L10Q9HD36 194 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 ZCCHC3Q9NUD5 404 aaKnown RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 IMP3Q9NV31 184 aaKnown RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 ZFR2Q9UPR6 939 aaKnown RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 A0A1W2PRQ8 180 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 CCRL2O00421 344 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 ENTPD6O75354 484 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 NTSP30990 170 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 GPC1P35052 558 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 BCL6P41182 706 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 KHKP50053 298 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 XKP51811 444 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 RPS3AP61247 264 aaKnown RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 GPM6BQ13491 265 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 MED22Q15528 200 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 SOWAHCQ53LP3 525 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 C2orf27AQ580R0 203 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 AGAP7PQ5VUJ5 663 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 RBM12BQ8IXT5 1001 aaKnown RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 HDDC3Q8N4P3 179 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 WDR36Q8NI36 951 aaKnown RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 BBS10Q8TAM1 723 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 IL4I1Q96RQ9 567 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 CHCHD6Q9BRQ6 235 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 C6orf62Q9GZU0 229 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 POLR2J3Q9H1A7 115 aaKnown RBP20.92■□□□□ 0.94
UPF3A-201ENST00000351487 XKR8Q9H6D3 395 aa20.92■□□□□ 0.94
UPF3A-201ENST00000351487 SNRNP200O75643 2136 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms