RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ITCHQ96J02 903 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 CXorf36Q9H7Y0 433 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 ACSS1Q9NUB1 689 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 GIMAP4Q9NUV9 329 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 C14orf105Q9NVL8 296 aa17.8■□□□□ 0.44
CHMP4A-201ENST00000347519 B2RBV5 119 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 IDSB3KWA1 339 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 C9J4A7 227 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TERTO14746 1132 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 KLF7O75840 302 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 DXOO77932 396 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 UMODP07911 640 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 CCNYL3P0C7X3 344 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TCN2P20062 427 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 F8A1P23610 371 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 NUDT2P50583 147 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 MGAT2Q10469 447 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 STX4Q12846 297 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 GAB1Q13480 694 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 CAPRIN1Q14444 709 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 ZSCAN26Q16670 478 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 COQ5Q5HYK3 327 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 C6orf10Q5SRN2 563 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 CPZQ66K79 652 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 CCDC121Q6ZUS5 278 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 LANCL3Q6ZV70 420 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 LRRC25Q8N386 305 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 ESX1Q8N693 406 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 NATD1Q8N6N6 113 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 ZBED6CLQ96FA7 236 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 SLC39A3Q9BRY0 314 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 SCNM1Q9BWG6 230 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 RMND5AQ9H871 391 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 EFCAB1Q9HAE3 211 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 SLC25A37Q9NYZ2 338 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 CROTQ9UKG9 612 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 A0A096LPI6 279 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TRBV5-3A0A0A0MS03 114 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 LOC101059948A0A1B0GTJ6 334 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 STMND1H3BQB6 276 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 RFXANKO14593 260 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 HEXBP07686 556 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 CT62P0C5K7 136 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 SLC35E2P0CK97 266 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 DDX5P17844 614 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 CPOXP36551 454 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 STAT5AP42229 794 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 EMP2P54851 167 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 RPS18P62269 152 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 SLC25A3Q00325 362 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 NFYCQ13952 458 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 MLC1Q15049 377 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TGIF1Q15583 401 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 LRIF1Q5T3J3 769 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 FAM111BQ6SJ93 734 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 DHDDSQ86SQ9 333 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 DTX1Q86Y01 620 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 RBM15BQ8NDT2 890 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 SIMC1Q8NDZ2 872 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 GOT1L1Q8NHS2 421 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 KAT2AQ92830 837 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 NKD1Q969G9 470 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 PANX1Q96RD7 426 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TUBB6Q9BUF5 446 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TMEM121BQ9BXQ6 578 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TRIM8Q9BZR9 551 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 WDR54Q9H977 334 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 ANKRA2Q9H9E1 313 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 VAPAQ9P0L0 249 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 C3orf18Q9UK00 162 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 ACSL6Q9UKU0 697 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 PTRH2Q9Y3E5 179 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 AK5Q9Y6K8 562 aa17.79■□□□□ 0.44
CHMP4A-201ENST00000347519 TCRBV16S1A1N1A0A5B0 115 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 ERICH4A6NGS2 130 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 A8MUA0 341 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 UNC5CO95185 931 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 RAB40ALP0C0E4 278 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 NT5EP21589 574 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 STT3AP46977 705 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 TRPC1P48995 793 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 NCALDP61601 193 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 NSDHLQ15738 373 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 TRMT5Q32P41 509 aaKnown RBP17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 ZNF628Q5EBL2 1059 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 C8orf82Q6P1X6 216 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 VPS37AQ8NEZ2 397 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 LRRC58Q96CX6 371 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 AURKBQ96GD4 344 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 CRB3Q9BUF7 120 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 TAS2R9Q9NYW1 312 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 TAS2R1Q9NYW7 299 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 PCDHB14Q9Y5E9 798 aa17.78■□□□□ 0.44
CHMP4A-201ENST00000347519 HRKO00198 91 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 ALOX12BO75342 701 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 KCNH1O95259 989 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 ATP1B1P05026 303 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 CD82P27701 267 aa17.77■□□□□ 0.43
CHMP4A-201ENST00000347519 MPIP34949 423 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms