RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CST1P01037 141 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 VIPP01282 170 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 UGT2B7P16662 529 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 CHI3L1P36222 383 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 CLCN2P51788 898 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 RAB8AP61006 207 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SLAMF1Q13291 335 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 HEPACAMQ14CZ8 416 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 ADPRMQ3LIE5 342 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 TMEM35AQ53FP2 167 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 RNF220Q5VTB9 566 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 ANKRD34AQ69YU3 496 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 ABHD17CQ6PCB6 329 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 VN1R4Q7Z5H5 301 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 TAF8Q7Z7C8 310 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 CARM1Q86X55 608 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF761Q86XN6 746 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 HS3ST5Q8IZT8 346 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 TRIML2Q8N7C3 387 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 SCAIQ8N9R8 606 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 TFAP2CQ92754 450 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 GSDMCQ9BYG8 508 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 MAGIXQ9H6Y5 334 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 DNAJB9Q9UBS3 223 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 FBXL21Q9UKT6 434 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 FAF1Q9UNN5 650 aaPredicted RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 CORO2BQ9UQ03 480 aa8.74□□□□□ -1.01
ATG4A-202ENST00000345734 WBP11Q9Y2W2 641 aaKnown RBP8.74□□□□□ -1.01
ATG4A-202ENST00000345734 GLOD5A6NK44 160 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 ZW10O43264 779 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 TBX19O60806 448 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 GCM2O75603 506 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-202ENST00000345734 SNAP29O95721 258 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 GNAO1P09471 354 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 FAM58BPP0C7Q3 252 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 SPTBP11277 2137 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 FOSL2P15408 326 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 IL1RNP18510 177 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 MAGP20916 626 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 HIST1H1TP22492 207 aaPredicted RBP8.73□□□□□ -1.01
ATG4A-202ENST00000345734 CERS1P27544 350 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 RPS9P46781 194 aaKnown RBP8.73□□□□□ -1.01
ATG4A-202ENST00000345734 MANFP55145 182 aaKnown RBP8.73□□□□□ -1.01
ATG4A-202ENST00000345734 UBE2IP63279 158 aaKnown RBP8.73□□□□□ -1.01
ATG4A-202ENST00000345734 TXNL4AP83876 142 aaKnown RBP8.73□□□□□ -1.01
ATG4A-202ENST00000345734 VEZF1Q14119 521 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 KIR2DS3Q14952 304 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 NDUFAF5Q5TEU4 345 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 FCRL6Q6DN72 434 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 FBXO42Q6P3S6 717 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 LYPD4Q6UWN0 246 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 TMEM179BQ7Z7N9 219 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 EID3Q8N140 333 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 ACOT4Q8N9L9 421 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 KCT2Q8NC54 265 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 OR52N2Q8NGI0 321 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 SLC37A2Q8TED4 501 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 GIMAP1Q8WWP7 306 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 TM9SF2Q99805 663 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 ADI1Q9BV57 179 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 SPATA9Q9BWV2 254 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 EPS8L2Q9H6S3 715 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 VNN3Q9NY84 501 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 ABCG2Q9UNQ0 655 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 SAMD4AQ9UPU9 718 aaKnown RBP8.73□□□□□ -1.01
ATG4A-202ENST00000345734 SPEGQ15772 3267 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 EML5Q05BV3 1969 aa8.73□□□□□ -1.01
ATG4A-202ENST00000345734 A0A1B0GTW7 788 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 A0A1W2PR48 441 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 GNGT2O14610 69 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PGRMC2O15173 223 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 B4GALT2O60909 372 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CTSVO60911 334 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF217O75362 1048 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 DIRAS1O95057 198 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CLIC3O95833 236 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SEMG1P04279 462 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 WNT1P04628 370 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CTSEP14091 401 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 DRD2P14416 443 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 UQCRC2P22695 453 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ATP5A1P25705 553 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PTGER1P34995 402 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PCGF2P35227 344 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 LSSP48449 732 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CDK9P50750 372 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 STARD6P59095 220 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 MERTKQ12866 999 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 HSPB3Q12988 150 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 GCNT6Q5T4J0 391 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 VHLLQ6RSH7 139 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CBLL1Q75N03 491 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 STK32CQ86UX6 486 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ZDHHC21Q8IVQ6 265 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ZCCHC7Q8N3Z6 543 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 TBC1D19Q8N5T2 526 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms