RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FAM46BQ96A09 425 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 TSGA13Q96PP4 275 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 OR6C74A6NCV1 312 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 FAM163BP0C2L3 166 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 RAC2P15153 192 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 RHBDL3P58872 404 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 OR4F3Q6IEY1 312 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 LCN8Q6JVE9 175 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 SMAP2Q8WU79 429 aaPredicted RBP18.59■□□□□ 0.57
HDAC4-201ENST00000345617 RRNAD1Q96FB5 475 aaKnown RBP18.59■□□□□ 0.57
HDAC4-201ENST00000345617 GNG13Q9P2W3 67 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 ARHGEF15O94989 841 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 MTNR1AP48039 350 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 DAOAP59103 153 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 FBXO48Q5FWF7 155 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 CXCL17Q6UXB2 119 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 C7orf43Q8WVR3 580 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 TRIB2Q92519 343 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 REEP4Q9H6H4 257 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 RETP07949 1114 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 CHRNB1P11230 501 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 HLA-EP13747 358 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 KEAP1Q14145 624 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 GALEQ14376 348 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 SFXN5Q8TD22 340 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 HERVK_113Q902F9 699 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 PELOQ9BRX2 385 aaKnown RBP18.59■□□□□ 0.57
HDAC4-201ENST00000345617 MAFBQ9Y5Q3 323 aaPredicted RBP18.59■□□□□ 0.57
HDAC4-201ENST00000345617 A0A1B0GVT2 93 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 RFC2P35250 354 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 PAPD4Q6PIY7 484 aaKnown RBP18.59■□□□□ 0.57
HDAC4-201ENST00000345617 TEX26Q8N6G2 289 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 POLDIP3Q9BY77 421 aaKnown RBP18.59■□□□□ 0.57
HDAC4-201ENST00000345617 SMOC2Q9H3U7 446 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 PCDHA2Q9Y5H9 948 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 BCL9O00512 1426 aa18.59■□□□□ 0.57
HDAC4-201ENST00000345617 EVI2BP34910 448 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 THBS2P35442 1172 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 FLYWCH1Q4VC44 716 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 LILRB2Q8N423 598 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 EVLQ9UI08 416 aaPredicted RBP18.58■□□□□ 0.57
HDAC4-201ENST00000345617 LILRB5O75023 590 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 CD52P31358 61 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 SUMF2Q8NBJ7 301 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 LRCH3Q96II8 777 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 WDR45Q9Y484 360 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 RAB8AP61006 207 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 HTD2P86397 168 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 ALKBH2Q6NS38 261 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 SLC18B1Q6NT16 456 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 RASGRP3Q8IV61 690 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 NTPCRQ9BSD7 190 aaKnown RBP18.58■□□□□ 0.57
HDAC4-201ENST00000345617 SLC22A14Q9Y267 594 aa18.58■□□□□ 0.57
HDAC4-201ENST00000345617 UBE2J1Q9Y385 318 aaPredicted RBP18.58■□□□□ 0.57
HDAC4-201ENST00000345617 DICER1Q9UPY3 1922 aaKnown RBP18.58■□□□□ 0.56
HDAC4-201ENST00000345617 NIPSNAP2O75323 286 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 SRA1Q9HD15 236 aaKnown RBP18.58■□□□□ 0.56
HDAC4-201ENST00000345617 RLIMQ9NVW2 624 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 ENPP5Q9UJA9 477 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 ANKRD66B4E2M5 251 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 SLC16A5O15375 505 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 FKBP1BP68106 108 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 PSPHP78330 225 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 RNASE10Q5GAN6 216 aaKnown RBP18.58■□□□□ 0.56
HDAC4-201ENST00000345617 GPR142Q7Z601 462 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 IL12RB2Q99665 862 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 PTPN18Q99952 460 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 SLC28A3Q9HAS3 691 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 ACTR10Q9NZ32 417 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 ADAM18Q9Y3Q7 739 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 PCDHGC4Q9Y5F7 938 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 PXDNQ92626 1479 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF850A8MQ14 1090 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 J3QR89 54 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 CH25HO95992 272 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 AGXTP21549 392 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 HMGCS1Q01581 520 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 TEX10Q9NXF1 929 aaPredicted RBP18.58■□□□□ 0.56
HDAC4-201ENST00000345617 GPRC5BQ9NZH0 403 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 MEN1O00255 615 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 VILLO15195 856 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 ARPC5O15511 151 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 EFNA1P20827 205 aaPredicted RBP18.58■□□□□ 0.56
HDAC4-201ENST00000345617 PLP2Q04941 152 aa18.58■□□□□ 0.56
HDAC4-201ENST00000345617 USP50Q70EL3 339 aaPredicted RBP18.58■□□□□ 0.56
HDAC4-201ENST00000345617 MYO5AQ9Y4I1 1855 aaKnown RBP18.58■□□□□ 0.56
HDAC4-201ENST00000345617 A0A1W2PQL4 384 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-201ENST00000345617 CYB5BO43169 146 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 TYROBPO43914 113 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 HSD17B1P14061 328 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 DGKQP52824 942 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 SP2Q02086 613 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 OR4F6Q8NGB9 312 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 TIMM8BQ9Y5J9 83 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-201ENST00000345617 B4GALT5O43286 388 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 CREB1P16220 341 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 RIDAP52758 137 aaKnown RBP18.57■□□□□ 0.56
HDAC4-201ENST00000345617 TCEAL1Q15170 157 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 ASB3Q9Y575 518 aa18.57■□□□□ 0.56
HDAC4-201ENST00000345617 MALLQ13021 153 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms