RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SELENOWP63302 87 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 LASP1Q14847 261 aaKnown RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 ZIK1Q3SY52 487 aaPredicted RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 USP53Q70EK8 1073 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 TFAP2CQ92754 450 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 ELF4Q99607 663 aaPredicted RBP12.78□□□□□ -0.36
CDC42-202ENST00000344548 CCDC3Q9BQI4 270 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 WFDC6Q9BQY6 131 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 RBCK1Q9BYM8 510 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 VCXQ9H320 206 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 RUBCNLQ9H714 662 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 UCK1Q9HA47 277 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 RAB23Q9ULC3 237 aa12.78□□□□□ -0.36
CDC42-202ENST00000344548 WDFY3Q8IZQ1 3526 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 NINQ8N4C6 2090 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 FOXS1O43638 330 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 FGF17O60258 216 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 ALPLP05186 524 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 YAP1P46937 504 aaKnown RBP12.77□□□□□ -0.36
CDC42-202ENST00000344548 XKP51811 444 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 ARSFP54793 590 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 MYBPC1Q00872 1141 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 RBBP4Q09028 425 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 FUT5Q11128 374 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 MAP7Q14244 749 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 TEAD4Q15561 434 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 PRTGQ2VWP7 1150 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 AMZ1Q400G9 498 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 TMEM154Q6P9G4 183 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 FAM111BQ6SJ93 734 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 CA13Q8N1Q1 262 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 Q8N9G6 341 aaPredicted RBP12.77□□□□□ -0.36
CDC42-202ENST00000344548 OR7G2Q8NG99 324 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 ELP4Q96EB1 424 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 FBXL20Q96IG2 436 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 DOHHQ9BU89 302 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.36
CDC42-202ENST00000344548 RPS6KA6Q9UK32 745 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 ENTPD4Q9Y227 616 aa12.77□□□□□ -0.36
CDC42-202ENST00000344548 TMEM184BQ9Y519 407 aaPredicted RBP12.77□□□□□ -0.36
CDC42-202ENST00000344548 TNRC6BQ9UPQ9 1833 aaKnown RBP12.77□□□□□ -0.36
CDC42-202ENST00000344548 ADAMTS9Q9P2N4 1935 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 IGHV1OR21-1A0A087WYE8 117 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 A0A0A6YYC8 382 aaPredicted RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 CCDC163A0A0D9SF12 145 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 URADA6NGE7 173 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 RHPN2P1A8MT19 583 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 G3V2T6 193 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 I3L1I5 382 aaPredicted RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 GNGT2O14610 69 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 SUV39H1O43463 412 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 CSF2RBP32927 897 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 BUD31P41223 144 aaPredicted RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 MAT1AQ00266 395 aaKnown RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 SIM2Q14190 667 aaPredicted RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 SYT16Q17RD7 645 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 ZNF630Q2M218 657 aaPredicted RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 PLK5Q496M5 336 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 CCDC80Q76M96 950 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 COMTD1Q86VU5 262 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 LSRQ86X29 649 aaPredicted RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 CARM1Q86X55 608 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 TMEM105Q8N8V8 129 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 XAGE5Q8WWM1 108 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 EDAQ92838 391 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 RNF31Q96EP0 1072 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 NR1H4Q96RI1 486 aaPredicted RBP12.77□□□□□ -0.37
CDC42-202ENST00000344548 OSBPL11Q9BXB4 747 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 EQTNQ9NQ60 294 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 PILRBQ9UKJ0 227 aa12.77□□□□□ -0.37
CDC42-202ENST00000344548 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 J3KTA2 159 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 PGM3O95394 542 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 FABP3P05413 133 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 MATN1P21941 496 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 MPIP34949 423 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 SEPHS1P49903 392 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 TRMT12Q53H54 448 aaKnown RBP12.76□□□□□ -0.37
CDC42-202ENST00000344548 CRB2Q5IJ48 1285 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 PRAMEF17Q5VTA0 474 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 KLHL35Q6PF15 583 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
CDC42-202ENST00000344548 PACRGLQ8N7B6 248 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 GIMAP5Q96F15 307 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 ADI1Q9BV57 179 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 SPRTNQ9H040 489 aaPredicted RBP12.76□□□□□ -0.37
CDC42-202ENST00000344548 ERVMER34-1Q9H9K5 563 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 A4GALTQ9NPC4 353 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 NDUFAF4Q9P032 175 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 ZNF780BQ9Y6R6 833 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 LAMTOR5O43504 91 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 POLR2IP36954 125 aaKnown RBP12.76□□□□□ -0.37
CDC42-202ENST00000344548 PPP2R2BQ00005 443 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 MERTKQ12866 999 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 ERV3-1Q14264 604 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 PUM1Q14671 1186 aaKnown RBP eCLIP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms