RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TSSK6Q9BXA6 273 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 FAM118AQ9NWS6 357 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 PNPP00491 289 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 LAG3P18627 525 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 PTH2RP49190 550 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 SPATC1Q76KD6 591 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 FAM58AQ8N1B3 248 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 NFKBIDQ8NI38 313 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 RFPL2O75678 378 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 ALDOAP04075 364 aaKnown RBP16.95■□□□□ 0.3
SMAD4-201ENST00000342988 SPATA31D3P0C874 917 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 HBG1P69891 147 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 HBG2P69892 147 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 SPATA31D4Q6ZUB0 917 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 FAM83FQ8NEG4 500 aaPredicted RBP16.95■□□□□ 0.3
SMAD4-201ENST00000342988 OR2T27Q8NH04 317 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 FNDC9Q8TBE3 224 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 VSTM2BA6NLU5 285 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 BANF1O75531 89 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 NKX3-2P78367 333 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 KCNC4Q03721 635 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 F5H5P2 479 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 WNT9AO14904 365 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 CCL16O15467 120 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 KLK1P06870 262 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 ANKRD22Q5VYY1 191 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 HGSNATQ68CP4 663 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 OSBPL2Q9H1P3 480 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 ZDHHC3Q9NYG2 299 aa16.95■□□□□ 0.3
SMAD4-201ENST00000342988 MAP2K7O14733 419 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 CD97P48960 835 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 STK19P49842 368 aaPredicted RBP16.94■□□□□ 0.3
SMAD4-201ENST00000342988 F2RL1P55085 397 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SGCEO43556 437 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 HLA-DOBP13765 273 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SEC13P55735 322 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 MEF2DQ14814 521 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 RBMS3Q6XE24 437 aaKnown RBP16.94■□□□□ 0.3
SMAD4-201ENST00000342988 LRRTM4Q86VH4 590 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 EGFL6Q8IUX8 553 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SLC2A12Q8TD20 617 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 ACO2Q99798 780 aaKnown RBP16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SLC32A1Q9H598 525 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 EVI2BP34910 448 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 GLUD2P49448 558 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 TMEM119Q4V9L6 283 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 FRG2Q64ET8 278 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SLAIN1Q8ND83 568 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 FRG2BQ96QU4 278 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 TXNL1O43396 289 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 ERI3O43414 337 aaKnown RBP16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SLBPQ14493 270 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMAD4-201ENST00000342988 DDIT4LQ96D03 193 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 CSF2P04141 144 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 EDNRBP24530 442 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 BAMBIQ13145 260 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 CELF3Q5SZQ8 465 aaKnown RBP16.94■□□□□ 0.3
SMAD4-201ENST00000342988 CD84Q9UIB8 345 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 GAAP10253 952 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 ANKRD54Q6NXT1 300 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 GPR137CQ8N3F9 429 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 PYCR2Q96C36 320 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 LRIG1Q96JA1 1093 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 FAM173AQ9BQD7 235 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 PPLO60437 1756 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 BCKDHBP21953 392 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 KCTD20Q7Z5Y7 419 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 ST7LQ8TDW4 575 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 TSSK2Q96PF2 358 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 OR1F2PQ96R84 312 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 RNF32Q9H0A6 362 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 SLC38A1Q9H2H9 487 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 YARS2Q9Y2Z4 477 aaKnown RBP16.94■□□□□ 0.3
SMAD4-201ENST00000342988 GOLT1BQ9Y3E0 138 aa16.94■□□□□ 0.3
SMAD4-201ENST00000342988 hCG_1809904A0A1W2PP81 198 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 A0A1W2PPE2 198 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 A0A1W2PR64 198 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 A0A1W2PRV1 198 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 HBE1P02100 147 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 ETV6P41212 452 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 LIPKQ5VXJ0 399 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 DCP2Q8IU60 420 aaKnown RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 OR5L1Q8NGL2 311 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CORO2AQ92828 525 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PTERQ96BW5 349 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 A8MUI8 341 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A6P0DMU7 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A5P0DMU8 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A7P0DMV0 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A8P0DMV1 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A9P0DMV2 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A2Q5DJT8 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A1Q5HYN5 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 SFRP5Q5T4F7 317 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 NDUFAF5Q5TEU4 345 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CT45A3Q8NHU0 189 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 SFXN5Q8TD22 340 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 OR11A1Q9GZK7 315 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 DUSP22Q9NRW4 184 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms