RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PRAMEF27A3QJZ7 478 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 PRAMEF25A6NGN4 478 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 PROS1P07225 676 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 KHKP50053 298 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 EPS8Q12929 822 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 APOFQ13790 326 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 DEFB110Q30KQ9 67 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 KLHL35Q6PF15 583 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 TTC33Q6PID6 262 aaPredicted RBP18.84■□□□□ 0.61
RTN1-202ENST00000342503 C17orf82Q86X59 251 aaPredicted RBP18.84■□□□□ 0.61
RTN1-202ENST00000342503 ARMC8Q8IUR7 673 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 C19orf47Q8N9M1 422 aaKnown RBP18.84■□□□□ 0.61
RTN1-202ENST00000342503 DNASE2BQ8WZ79 361 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 MOAP1Q96BY2 351 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 NRBF2Q96F24 287 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 SLC38A3Q99624 504 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 CCDC3Q9BQI4 270 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 AMBRA1Q9C0C7 1298 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 FAM118AQ9NWS6 357 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 THUMPD1Q9NXG2 353 aaKnown RBP18.84■□□□□ 0.61
RTN1-202ENST00000342503 PDP1Q9P0J1 537 aaPredicted RBP18.84■□□□□ 0.61
RTN1-202ENST00000342503 SLC22A7Q9Y694 548 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 SCN2AQ99250 2005 aa18.84■□□□□ 0.61
RTN1-202ENST00000342503 CCDC88CQ9P219 2028 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 SLC9B1P1A6NJY1 282 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 LMO7DNF2Z398 122 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 EMC8O43402 210 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 SLC28A2O43868 658 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 FHP07954 510 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 ATP6V1B1P15313 513 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 RRM2P31350 389 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 SIM1P81133 766 aaPredicted RBP18.83■□□□□ 0.61
RTN1-202ENST00000342503 LTB4RQ15722 352 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 SYPL1Q16563 259 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 FOXB2Q5VYV0 432 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 BHLHB9Q6PI77 547 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 ZNF786Q8N393 782 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 OR56A1Q8NGH5 318 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 XAGE5Q8WWM1 108 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 GEMIN6Q8WXD5 167 aaKnown RBP18.83■□□□□ 0.61
RTN1-202ENST00000342503 ELP4Q96EB1 424 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 EPYCQ99645 322 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 YIPF4Q9BSR8 244 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.83■□□□□ 0.61
RTN1-202ENST00000342503 LYRM4Q9HD34 91 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 THSD1Q9NS62 852 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 UCKL1Q9NWZ5 548 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 P2RX2Q9UBL9 471 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 KNL1Q8NG31 2342 aa18.83■□□□□ 0.61
RTN1-202ENST00000342503 LILRA5A6NI73 299 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 CLPTM1O96005 669 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 HMGN2P05204 90 aaKnown RBP18.83■□□□□ 0.6
RTN1-202ENST00000342503 CTSBP07858 339 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 TLX1P31314 330 aaPredicted RBP18.83■□□□□ 0.6
RTN1-202ENST00000342503 MC3RP41968 323 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 CAPZBP47756 277 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 DAPP51397 102 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 C21orf59P57076 290 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 KCNAB2Q13303 367 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 TTC23Q5W5X9 447 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 CYP4Z1Q86W10 505 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 ZNF555Q8NEP9 628 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 NUP43Q8NFH3 380 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 OR4K14Q8NGD5 310 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 OTUB1Q96FW1 271 aaPredicted RBP18.83■□□□□ 0.6
RTN1-202ENST00000342503 MUS81Q96NY9 551 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 ZNF300Q96RE9 604 aaPredicted RBP18.83■□□□□ 0.6
RTN1-202ENST00000342503 DUSP15Q9H1R2 295 aaPredicted RBP18.83■□□□□ 0.6
RTN1-202ENST00000342503 CLK4Q9HAZ1 481 aaKnown RBP18.83■□□□□ 0.6
RTN1-202ENST00000342503 MS4A12Q9NXJ0 267 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 NAALAD2Q9Y3Q0 740 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 TESMINQ9Y4I5 508 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 ORC6Q9Y5N6 252 aa18.83■□□□□ 0.6
RTN1-202ENST00000342503 SPAG17Q6Q759 2223 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 TMEM247A6NEH6 219 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 GALR3O60755 368 aaPredicted RBP18.82■□□□□ 0.6
RTN1-202ENST00000342503 MITFO75030 526 aaPredicted RBP18.82■□□□□ 0.6
RTN1-202ENST00000342503 CD247P20963 164 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 IGFBP5P24593 272 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 MAGEA8P43361 318 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 YAP1P46937 504 aaKnown RBP18.82■□□□□ 0.6
RTN1-202ENST00000342503 XKP51811 444 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 PRR5P85299 388 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 SIM2Q14190 667 aaPredicted RBP18.82■□□□□ 0.6
RTN1-202ENST00000342503 LASP1Q14847 261 aaKnown RBP18.82■□□□□ 0.6
RTN1-202ENST00000342503 DUSP7Q16829 419 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 OGFOD3Q6PK18 319 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 FAM92BQ6ZTR7 304 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 OR4N5Q8IXE1 308 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 SHISA5Q8N114 240 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 LRRC25Q8N386 305 aaPredicted RBP18.82■□□□□ 0.6
RTN1-202ENST00000342503 TSPAN14Q8NG11 270 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 OR5T3Q8NGG3 340 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 KAT2AQ92830 837 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 C16orf58Q96GQ5 468 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 ZNF347Q96SE7 839 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 MAP3K3Q99759 626 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 C3orf14Q9HBI5 128 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 THEGQ9P2T0 379 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 MUTYHQ9UIF7 546 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms