RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 CCDC3Q9BQI4 270 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 PRDM9Q9NQV7 894 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 MROH6A6NGR9 719 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 I6L893 689 aaPredicted RBP11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 FAAHO00519 579 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 SCAMP2O15127 329 aaKnown RBP11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 PAHP00439 452 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 OR12D2P58182 307 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 CDC20Q12834 499 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 SMUG1Q53HV7 270 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 LINC00299Q6ZSB3 139 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 YIPF6Q96EC8 236 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 THAP7Q9BT49 309 aaPredicted RBP11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 IL26Q9NPH9 171 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 IL17CQ9P0M4 197 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.5
SSX2IP-201ENST00000342203 GABRR3A8MPY1 467 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 ADAP00813 363 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 PROS1P07225 676 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 FAM163BP0C2L3 166 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 F8A1P23610 371 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 GPR4P46093 362 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 CEBPGP53567 150 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 VEZF1Q14119 521 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 KCT2Q8NC54 265 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 OR8S1Q8NH09 359 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 NXPE2Q96DL1 559 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 CNIH4Q9P003 139 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 ARPC4-TTLL3A0A0A6YYG9 625 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 FLRT2O43155 660 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 PI15O43692 258 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 SLC19A2O60779 497 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 PQBP1O60828 265 aaKnown RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 GPX5O75715 221 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 F2P00734 622 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 HLA-EP13747 358 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 EDNRAP25101 427 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 RRAS2P62070 204 aaPredicted RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 OAFQ86UD1 273 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 DOK4Q8TEW6 326 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 ZC3H10Q96K80 434 aaKnown RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 C11orf84Q9BUA3 381 aaPredicted RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 RBFOX1Q9NWB1 397 aaKnown RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 TAC3Q9UHF0 121 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 PRSS21Q9Y6M0 314 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 HOXA2O43364 376 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 KCNK5O95279 499 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 PRR5P85299 388 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 SF3A2Q15428 464 aaKnown RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 TPRG1Q6ZUI0 275 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 KRT77Q7Z794 578 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 SYT14Q8NB59 555 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 OR2AP1Q8NGE2 309 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 GRHL3Q8TE85 626 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 TSEN15Q8WW01 171 aaKnown RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 OTUB2Q96DC9 234 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 BPIP17213 487 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 ZNF140P52738 457 aaPredicted RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 NDUFAF5Q5TEU4 345 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 SIGIRRQ6IA17 410 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 OR51A7Q8NH64 312 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 RIPOR3Q96MK2 946 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 MNTQ99583 582 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 POT1Q9NUX5 634 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 CUEDC1Q9NWM3 386 aaPredicted RBP11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 FKBP14Q9NWM8 211 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 EDARQ9UNE0 448 aa11.95□□□□□ -0.5
SSX2IP-201ENST00000342203 KANTRA0A1W2PQU2 76 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 SPDEFO95238 335 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 GASTP01350 101 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 ACRV1P26436 265 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 STK19P49842 368 aaPredicted RBP11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 SCGB2B2Q4G0G5 96 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 XKR7Q5GH72 579 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 IRAK1BP1Q5VVH5 260 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 C6orf120Q7Z4R8 191 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 CMTM8Q8IZV2 173 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 TMEM30AQ9NV96 361 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 OR10H1Q9Y4A9 318 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 CSNK1G3Q9Y6M4 447 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 A0A1W2PRQ8 180 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 PRAMEF12O95522 483 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 ASGR1P07306 291 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 TLX1P31314 330 aaPredicted RBP11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 GCGRP47871 477 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 GBX2P52951 348 aaPredicted RBP11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 OC90Q02509 493 aaPredicted RBP11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 NDUFA9Q16795 377 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 PAQR6Q6TCH4 344 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 PHYKPLQ8IUZ5 450 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 NPLOC4Q8TAT6 608 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.94□□□□□ -0.57e-16■■□□□ 14.1
SSX2IP-201ENST00000342203 IL17FQ96PD4 163 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 TMEM27Q9HBJ8 222 aa11.94□□□□□ -0.5
SSX2IP-201ENST00000342203 OSGIN1Q9UJX0 560 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms