RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 A0A087X1B8 175 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 C2orf78A6NCI8 922 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 OR2T1O43869 369 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 MED6O75586 246 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 GLP2RO95838 553 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 SCG5P05408 212 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 PTPN3P26045 913 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 AQP1P29972 269 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 RNF144AP50876 292 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF33AQ06730 810 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ECH1Q13011 328 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 OR4D1Q15615 310 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ALG11Q2TAA5 492 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ANKS6Q68DC2 871 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 LYPD4Q6UWN0 246 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 DEF8Q6ZN54 512 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 WDR53Q7Z5U6 358 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 GPR149Q86SP6 731 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 KRTCAP2Q8N6L1 136 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 TM9SF4Q92544 642 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 SLAMF9Q96A28 289 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 C1GALT1C1Q96EU7 318 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC2A13Q96QE2 648 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 NLNQ9BYT8 704 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ELOVL4Q9GZR5 314 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 TMEM231Q9H6L2 316 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 CRLF2Q9HC73 371 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 MRPL15Q9P015 296 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 FKBPLQ9UIM3 349 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 MRPL11Q9Y3B7 192 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 C5orf52A6NGY3 159 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 TUBAL3A6NHL2 446 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 CASKO14936 926 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 STBD1O95210 358 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 MT-ND4P03905 459 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SULT1A3P0DMM9 295 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SULT1A4P0DMN0 295 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 HOXA6P31267 233 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 UBE2IP63279 158 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 CLDN10P78369 228 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 RBM39Q14498 530 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 ETV3LQ6ZN32 361 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 ISCA2Q86U28 154 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC43A2Q8N370 569 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SETD7Q8WTS6 366 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM120BQ96EK7 910 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 LRR1Q96L50 414 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 HS6ST2Q96MM7 605 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 CCDC115Q96NT0 180 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 TEFMQ96QE5 360 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 HHIPQ96QV1 700 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 GGACTQ9BVM4 153 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 GABARAPL1Q9H0R8 117 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 REEP1Q9H902 201 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 EXTL2Q9UBQ6 330 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 CRYL1Q9Y2S2 319 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 DMRT1Q9Y5R6 373 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 FXYD6-FXYD2A0A087WZ82 144 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 A0A0U1RQF3 1178 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 OR51F1A6NGY5 319 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 J3KR12 359 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 DVL2O14641 736 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF197O14709 1029 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SUSD5O60279 629 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 TPST2O60704 377 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 RP2O75695 350 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 GDF11O95390 407 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 C22orf31O95567 290 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 GLUD1P00367 558 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 TCRBP04435 133 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 RB1P06400 928 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 NFICP08651 508 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 CD3GP09693 182 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SPHARQ15513 63 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 USF2Q15853 346 aaPredicted RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 MICBQ29980 383 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 GFOD2Q3B7J2 385 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC39A12Q504Y0 691 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 ARHGAP15Q53QZ3 475 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SPANXN4Q5MJ08 99 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 C6orf136Q5SQH8 315 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 RAET1GQ6H3X3 334 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 LCLAT1Q6UWP7 414 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 B3GNT9Q6UX72 402 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 RHOUQ7L0Q8 258 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC29A4Q7RTT9 530 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC9B2Q86UD5 537 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC5A8Q8N695 610 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 TMEM185AQ8NFB2 350 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 OR9Q2Q8NGE9 314 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 NDRG1Q92597 394 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 GTPBP3Q969Y2 492 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 TMEM143Q96AN5 459 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 PRMT6Q96LA8 375 aaPredicted RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 FXYD6Q9H0Q3 95 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 ALX4Q9H161 411 aaPredicted RBP9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 SMOC1Q9H4F8 434 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 ENAMQ9NRM1 1142 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 ZFP57Q9NU63 452 aa9.19□□□□□ -0.94
PTCHD4-201ENST00000339488 CA14Q9ULX7 337 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms