RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 ZNF613Q6PF04 617 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 NPAS4Q8IUM7 802 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 OR6F1Q8NGZ6 308 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 SCRN2Q96FV2 425 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 CAMK1GQ96NX5 476 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 ZIC5Q96T25 663 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 PLCXD1Q9NUJ7 323 aa11.88□□□□□ -0.51
RIOK3-201ENST00000339486 A0A1W2PPK0 400 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF670-ZNF695F2Z2N8 137 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 J3QLW9 94 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 M0R233 179 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 RNASET2O00584 256 aaKnown RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 KLKB1P03952 638 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 HMGN1P05114 100 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF19P17023 458 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ATF6P18850 670 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 CD9P21926 228 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 KHKP50053 298 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 TMEM115Q12893 351 aaPredicted RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 MLLT11Q13015 90 aaPredicted RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 GRHL2Q6ISB3 625 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 NUDT13Q86X67 352 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 DNAJC5GQ8N7S2 189 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 OR52P1PQ8NH57 321 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 IL17FQ96PD4 163 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 FERD3LQ96RJ6 166 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 FUZQ9BT04 418 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 IFT27Q9BW83 186 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 TTTY10Q9BZA0 68 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 RANBP3Q9H6Z4 567 aaPredicted RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 BRD7Q9NPI1 651 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 NUDT15Q9NV35 164 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 LHX3Q9UBR4 397 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 MMP20O60882 483 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 SPINT3P49223 89 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 TSPAN5P62079 268 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 KCNJ10P78508 379 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 GAB1Q13480 694 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 GBX1Q14549 363 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 TMEM44Q2T9K0 475 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 CLLU1OSQ5K130 101 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 FAM205BPQ63HN1 556 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 OTOP2Q7RTS6 562 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 CALHM3Q86XJ0 350 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 PTOV1Q86YD1 416 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 LINC00471Q8N535 108 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF655Q8N720 491 aaPredicted RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 FAM98AQ8NCA5 519 aaKnown RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 GINS4Q9BRT9 223 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 CACNG6Q9BXT2 260 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 RETREG1Q9H6L5 497 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ASAH2Q9NR71 780 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ASIC5Q9NY37 505 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 AKAP7Q9P0M2 348 aaPredicted RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 SNX11Q9Y5W9 270 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 SLC9A3R1O14745 358 aaPredicted RBP11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ALPPP05187 535 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ALAS2P22557 587 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 PRR5P85299 388 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 FAHD1Q6P587 224 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF783Q6ZMS7 281 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 GJD3Q8N144 294 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 C10orf111Q8N326 155 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 SNX33Q8WV41 574 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 NEIL2Q969S2 332 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 PITX2Q99697 317 aa11.87□□□□□ -0.51
RIOK3-201ENST00000339486 DSCR3O14972 297 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 CSO75390 466 aaKnown RBP11.86□□□□□ -0.51
RIOK3-201ENST00000339486 KDM4BO94953 1096 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 EPHX1P07099 455 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 C8orf89P0DMQ9 161 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 IDSP22304 550 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 TGFBR2P37173 567 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 GMFBP60983 142 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 MAP4K2Q12851 820 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 RFPL4BQ6ZWI9 263 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 VRK3Q8IV63 474 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 WDR48Q8TAF3 677 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 CYB5D2Q8WUJ1 264 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 OR5P2Q8WZ92 322 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 FOXJ1Q92949 421 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 F2RL3Q96RI0 385 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 SORBS1Q9BX66 1292 aaKnown RBP11.86□□□□□ -0.51
RIOK3-201ENST00000339486 SLC52A3Q9NQ40 469 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 ZNF226Q9NYT6 803 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 MAB21L2Q9Y586 359 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 RIIAD1A6NNX1 92 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 POP7O75817 140 aaKnown RBP11.86□□□□□ -0.51
RIOK3-201ENST00000339486 PTPN2P17706 415 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 DRD5P21918 477 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 HOXA9P31269 272 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 MAGEA2P43356 314 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 STARP49675 285 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 WDR5P61964 334 aaKnown RBP11.86□□□□□ -0.51
RIOK3-201ENST00000339486 POU4F3Q15319 338 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 PAQR6Q6TCH4 344 aa11.86□□□□□ -0.51
RIOK3-201ENST00000339486 OR9A1PQ8NGU1 263 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms