RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DEFB133Q30KQ1 61 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CNPY1Q3B7I2 92 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CRB2Q5IJ48 1285 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 REEP3Q6NUK4 255 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC48A1Q6P1K1 146 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TMEM26Q6ZUK4 368 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CCDC71Q8IV32 467 aaPredicted RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 NLGN4XQ8N0W4 816 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 SVOPLQ8N434 492 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 AVL9Q8NBF6 648 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 PJA1Q8NG27 643 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 OR9Q2Q8NGE9 314 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 LMX1AQ8TE12 382 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 C10orf90Q96M02 699 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 FEVQ99581 238 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TREX2Q9BQ50 279 aaPredicted RBP6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 TWSG1Q9GZX9 223 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 ADNPQ9H2P0 1102 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 RIBC2Q9H4K1 309 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 CTPS2Q9NRF8 586 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 BAG5Q9UL15 447 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
SRFBP1-201ENST00000339397 A0A1W2PR77 199 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ENO4A6NNW6 628 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 XPNPEP2O43895 674 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 TPST2O60704 377 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 NDUFS2O75306 463 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 NTN1O95631 604 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SMIM10L1P0DMW3 83 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 DRD2P14416 443 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 MATN1P21941 496 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 IGFBP5P24593 272 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 DNAJA1P31689 397 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 CLK3P49761 638 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 RNF144AP50876 292 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ISL1P61371 349 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 STXBP1P61764 594 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 CD47Q08722 323 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SMN1Q16637 294 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 NKAIN2Q5VXU1 208 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 KDM4DQ6B0I6 523 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 FAM111BQ6SJ93 734 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 FAM92BQ6ZTR7 304 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ATG16L2Q8NAA4 619 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 VANGL1Q8TAA9 524 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC22A18Q96BI1 424 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ARSGQ96EG1 525 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SMIM10Q96HG1 83 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 NIPSNAP1Q9BPW8 284 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 RBCK1Q9BYM8 510 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 MRPS26Q9BYN8 205 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 REEP1Q9H902 201 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 LIN28AQ9H9Z2 209 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 NEUROD4Q9HD90 331 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 CD320Q9NPF0 282 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ACSS1Q9NUB1 689 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 PADI2Q9Y2J8 665 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 LYVE1Q9Y5Y7 322 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 CCDC160A6NGH7 325 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC9B1P1A6NJY1 282 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 H0YAE9 185 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SGK494L7N484 410 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 TLR4O00206 839 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC28A2O43868 658 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 TBX19O60806 448 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 MFN2O95140 757 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 EPPINO95925 133 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 FESP07332 822 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 CHRM4P08173 479 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC35G6P0C7Q6 338 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ITGA1P56199 1179 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF630Q2M218 657 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 LEXMQ3ZCV2 418 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 KLHL17Q6TDP4 642 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 PIWIL3Q7Z3Z3 882 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 HIPK1Q86Z02 1210 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ARL14Q8N4G2 192 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 SLC5A8Q8N695 610 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 OR7G2Q8NG99 324 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 PSMA8Q8TAA3 256 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 BAHD1Q8TBE0 780 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 APOBEC4Q8WW27 367 aaKnown RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 TBC1D20Q96BZ9 403 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 COL21A1Q96P44 957 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ZNF300Q96RE9 604 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 PHOX2BQ99453 314 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 MAP3K3Q99759 626 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 ZFYVE21Q9BQ24 234 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 FAIM2Q9BWQ8 316 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 TBC1D17Q9HA65 648 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 RASSF1Q9NS23 344 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 POT1Q9NUX5 634 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 USE1Q9NZ43 259 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 IFT80Q9P2H3 777 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 KLHL3Q9UH77 587 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 DMTF1Q9Y222 760 aa6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 HEMK1Q9Y5R4 338 aaPredicted RBP6.97□□□□□ -1.29
SRFBP1-201ENST00000339397 OR5K3A6NET4 321 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 C2orf74A8MZ97 194 aa6.96□□□□□ -1.29
SRFBP1-201ENST00000339397 PTGES3LE9PB15 166 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms