RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LRRK1Q38SD2 2015 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 YY2O15391 372 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 KAT7O95251 611 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 C1orf105O95561 183 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 CSF3P09919 207 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 CHMP24386 653 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 PTX3P26022 381 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-201ENST00000338910 HLA-DMAP28067 261 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 P2RY2P41231 377 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 TGM4P49221 684 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 ATAT1Q5SQI0 421 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 ZNF547Q8IVP9 402 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 TRIM48Q8IWZ4 208 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 WDR20Q8TBZ3 569 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 MAL2Q969L2 176 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 TRMT61AQ96FX7 289 aaKnown RBP17.84■□□□□ 0.45
PSPC1-201ENST00000338910 EPHX3Q9H6B9 360 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 SGK2Q9HBY8 427 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 PRSS16Q9NQE7 514 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 VPS29Q9UBQ0 182 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 FZD4Q9ULV1 537 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 SATB2Q9UPW6 733 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 PRUNE2Q8WUY3 3088 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 ZNF670-ZNF695F2Z2N8 137 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 POP7O75817 140 aaKnown RBP17.83■□□□□ 0.45
PSPC1-201ENST00000338910 ZNF8P17098 575 aaPredicted RBP17.83■□□□□ 0.45
PSPC1-201ENST00000338910 TNFRSF1BP20333 461 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 SOX3P41225 446 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 CRYBB2P43320 205 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 GZMKP49863 264 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 CDH12P55289 794 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 SELENOWP63302 87 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 CNTN1Q12860 1018 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 TARDBPQ13148 414 aaKnown RBP eCLIP17.83■□□□□ 0.452e-16■■■■■ 57
PSPC1-201ENST00000338910 EXOC3L2Q2M3D2 409 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 ZNF658BQ4V348 819 aaPredicted RBP17.83■□□□□ 0.45
PSPC1-201ENST00000338910 PLCZ1Q86YW0 608 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 YIPF7Q8N8F6 280 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 PLA2G15Q8NCC3 412 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 OR8J2Q8NGG1 315 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 CSGALNACT1Q8TDX6 532 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 UBASH3BQ8TF42 649 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 ZCCHC2Q9C0B9 1178 aaKnown RBP17.83■□□□□ 0.45
PSPC1-201ENST00000338910 FAM120CQ9NX05 1096 aaKnown RBP17.83■□□□□ 0.45
PSPC1-201ENST00000338910 KLHL21Q9UJP4 597 aa17.83■□□□□ 0.45
PSPC1-201ENST00000338910 LSM2Q9Y333 95 aaKnown RBP17.83■□□□□ 0.45
PSPC1-201ENST00000338910 ATG2BQ96BY7 2078 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 A8MVJ9 347 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 UGDHO60701 494 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 CCNB2O95067 398 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 GDI1P31150 447 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 NUDT1P36639 197 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 KIR2DL3P43628 341 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 ALDH9A1P49189 494 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 CDC42P60953 191 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 RHAGQ02094 409 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 RUNX1T1Q06455 604 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 DLX2Q07687 328 aaPredicted RBP17.83■□□□□ 0.44
PSPC1-201ENST00000338910 TNK1Q13470 666 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 PTGES3Q15185 160 aaKnown RBP17.83■□□□□ 0.44
PSPC1-201ENST00000338910 TIGD3Q6B0B8 471 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 ANKK1Q8NFD2 765 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 OR9Q2Q8NGE9 314 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 OR56A3Q8NH54 315 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 CDC26Q8NHZ8 85 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 CXorf40AQ8TE69 158 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF480Q8WV37 535 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 NEIL2Q969S2 332 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 PRRG3Q9BZD7 231 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 PCM1Q15154 2024 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 KIAA1549LQ6ZVL6 1849 aa17.83■□□□□ 0.44
PSPC1-201ENST00000338910 C12orf71A8MTZ7 269 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 M6PRP20645 277 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 PCGF2P35227 344 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 HOXC5Q00444 222 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 SPIBQ01892 262 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 NFE2L1Q14494 772 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 LARS2Q15031 903 aaKnown RBP17.82■□□□□ 0.44
PSPC1-201ENST00000338910 XKRXQ6PP77 449 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 FAM131AQ6UXB0 335 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 BPHLQ86WA6 291 aaPredicted RBP17.82■□□□□ 0.44
PSPC1-201ENST00000338910 SYT12Q8IV01 421 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 IQCF2Q8IXL9 164 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 FCRL1Q96LA6 429 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 MAGEB10Q96LZ2 347 aaPredicted RBP17.82■□□□□ 0.44
PSPC1-201ENST00000338910 THAP10Q9P2Z0 257 aaPredicted RBP17.82■□□□□ 0.44
PSPC1-201ENST00000338910 SEC14L4Q9UDX3 406 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 PCYT1BQ9Y5K3 369 aaPredicted RBP17.82■□□□□ 0.44
PSPC1-201ENST00000338910 BRWD1Q9NSI6 2320 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 PRMT3O60678 531 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 CSF2P04141 144 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 PIPP12273 146 aaPredicted RBP17.82■□□□□ 0.44
PSPC1-201ENST00000338910 LAMP2P13473 410 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 COX7A2P14406 83 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 SOX9P48436 509 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 DPTQ07507 201 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF765Q7L2R6 523 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 MIXL1Q9H2W2 232 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 ATP13A2Q9NQ11 1180 aa17.82■□□□□ 0.44
PSPC1-201ENST00000338910 CLEC1BQ9P126 229 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms