RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RBM18Q96H35 190 aaKnown RBP14.16□□□□□ -0.14
PRKN-201ENST00000338468 GATA5Q9BWX5 397 aaPredicted RBP14.16□□□□□ -0.14
PRKN-201ENST00000338468 WDR41Q9HAD4 459 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 SLC17A7Q9P2U7 560 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 YARS2Q9Y2Z4 477 aaKnown RBP14.16□□□□□ -0.14
PRKN-201ENST00000338468 PCDHA9Q9Y5H5 950 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 SVILO95425 2214 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 WWP2O00308 870 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 NME2P1O60361 137 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 SPAG7O75391 227 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 SLC35E2P0CK97 266 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 COX7A2P14406 83 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 NME2P22392 152 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 SERPINB3P29508 390 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 GALNSP34059 522 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 ZNF844Q08AG5 666 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 MDGA2Q7Z553 956 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 HORMAD2Q8N7B1 307 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 DNAJB8Q8NHS0 232 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 FBXL20Q96IG2 436 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 C5orf34Q96MH7 638 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 FRMD6Q96NE9 622 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 FAM111AQ96PZ2 611 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 RASL10BQ96S79 203 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 SHCBP1LQ9BZQ2 653 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 NMRK1Q9NWW6 199 aa14.15□□□□□ -0.14
PRKN-201ENST00000338468 ERRFI1Q9UJM3 462 aaPredicted RBP14.15□□□□□ -0.14
PRKN-201ENST00000338468 WIPF3A6NGB9 483 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 OR10H2O60403 315 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 OR6B1O95007 311 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 LDLRP01130 860 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 CT62P0C5K7 136 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 ALDH3A1P30838 453 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 SOX18P35713 384 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 SOX3P41225 446 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 SSR4P51571 173 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 NAA20P61599 178 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 ERVK-8P63133 956 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 DUSP2Q05923 314 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 MAPKAPK3Q16644 382 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 CFAP157Q5JU67 520 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 RNFT1Q5M7Z0 435 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 SLC48A1Q6P1K1 146 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.14□□□□□ -0.15
PRKN-201ENST00000338468 TMEM156Q8N614 296 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 TMEM178AQ8NBL3 297 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 OR4K14Q8NGD5 310 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 RIT1Q92963 219 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 PELOQ9BRX2 385 aaKnown RBP14.14□□□□□ -0.15
PRKN-201ENST00000338468 MECRQ9BV79 373 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 CXorf21Q9HAI6 301 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 HEY2Q9UBP5 337 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 COPS7AQ9UBW8 275 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 MCM8Q9UJA3 840 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 ERVK-19Q9WJR5 959 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 CCL27Q9Y4X3 112 aa14.14□□□□□ -0.15
PRKN-201ENST00000338468 C1orf226A1L170 272 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 TYROBPO43914 113 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 PCDH7O60245 1069 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 TRIM13O60858 407 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 NADKO95544 446 aaPredicted RBP14.13□□□□□ -0.15
PRKN-201ENST00000338468 CRYABP02511 175 aaKnown RBP14.13□□□□□ -0.15
PRKN-201ENST00000338468 CPMP14384 443 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 PIK3R1P27986 724 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 XKP51811 444 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 SLC37A1P57057 533 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 KCNK10P57789 538 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 TRA2BP62995 288 aaKnown RBP14.13□□□□□ -0.15
PRKN-201ENST00000338468 ZNF267Q14586 743 aaPredicted RBP14.13□□□□□ -0.15
PRKN-201ENST00000338468 GALNT18Q6P9A2 607 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 TRIM46Q7Z4K8 759 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 ZGRF1Q86YA3 2104 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 SIAH3Q8IW03 269 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 CYP4Z2PQ8N1L4 340 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 CPSF7Q8N684 471 aaKnown RBP14.13□□□□□ -0.15
PRKN-201ENST00000338468 OR5L2Q8NGL0 311 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 NUBPLQ8TB37 319 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 TCP10LQ8TDR4 215 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 ZNF681Q96N22 645 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 CNPPD1Q9BV87 410 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 SIRT5Q9NXA8 310 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 MID2Q9UJV3 735 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 SLC5A6Q9Y289 635 aa14.13□□□□□ -0.15
PRKN-201ENST00000338468 CCDC151A5D8V7 595 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 H3BQF6 201 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 GUCY1B2O75343 617 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 CHRNGP07510 517 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 IL3P08700 152 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 S1PR1P21453 382 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 ELAVL4P26378 380 aaKnown RBP14.12□□□□□ -0.15
PRKN-201ENST00000338468 SSTR4P31391 388 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 TIA1P31483 386 aaKnown RBP eCLIP14.12□□□□□ -0.15
PRKN-201ENST00000338468 ARRB2P32121 409 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 PTGER1P34995 402 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 BTKQ06187 659 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 MGAT2Q10469 447 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 FUT7Q11130 342 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 ASPHQ12797 758 aa14.12□□□□□ -0.15
PRKN-201ENST00000338468 ELOAQ14241 798 aaKnown RBP14.12□□□□□ -0.15
PRKN-201ENST00000338468 EBPQ15125 230 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms