RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 HCN4Q9Y3Q4 1203 aa13.87□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SEC16AO15027 2179 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 WDR87Q6ZQQ6 2873 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 DSCR3O14972 297 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GMNNO75496 209 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CDC123O75794 336 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ETFAP13804 333 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PORP16435 677 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CSTF2P33240 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZFP36L1Q07352 338 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TRA2AQ13595 282 aaKnown RBP eCLIP13.86□□□□□ -0.191e-7■□□□□ 8.1
CDK5RAP3-201ENST00000338399 TP53BP2Q13625 1128 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 LTB4RQ15722 352 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CPZQ66K79 652 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 AAGABQ6PD74 315 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TMEM107Q6UX40 140 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 C6orf120Q7Z4R8 191 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PTOV1Q86YD1 416 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZZZ3Q8IYH5 903 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ADAMTS18Q8TE60 1221 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 KAT2AQ92830 837 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NEURL3Q96EH8 262 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SLC7A5P2Q9GIP4 190 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CDC14AQ9UNH5 594 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MRPS33Q9Y291 106 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FER1L5A0AVI2 2057 aa13.86□□□□□ -0.19
CDK5RAP3-201ENST00000338399 COL27A1Q8IZC6 1860 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TCRBV3S1A0A5B6 114 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CXCR6O00574 342 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MC3RP41968 323 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 XCR1P46094 333 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PDX1P52945 283 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 AP2B1P63010 937 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RHDQ02161 417 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 VAC14Q08AM6 782 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SNCBQ16143 134 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ADRM1Q16186 407 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 VMACQ2NL98 169 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 YOD1Q5VVQ6 348 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TBC1D20Q96BZ9 403 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NSMCE2Q96MF7 247 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RAD21L1Q9H4I0 556 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ANKRA2Q9H9E1 313 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZNF304Q9HCX3 659 aa13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZCCHC3Q9NUD5 404 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-201ENST00000338399 A0A1B0GX78 115 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OR2W5A6NFC9 320 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 AQP12BA6NM10 295 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 EFCAB7A8K855 629 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GDF9O60383 454 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 LRP3O75074 770 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 JRKO75564 520 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TIAF1O95411 115 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 C8BP07358 591 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FHP07954 510 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PRKAG1P54619 331 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RPS26P62854 115 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 BTG2P78543 158 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MRPS35P82673 323 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FADDQ13158 208 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SLC13A2Q13183 592 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ERICH5Q6P6B1 374 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TMEM64Q6YI46 380 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TMEM126BQ8IUX1 230 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 AQP12AQ8IXF9 295 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZNF595Q8IYB9 648 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ENDOVQ8N8Q3 282 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MAL2Q969L2 176 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NCLNQ969V3 563 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ELP4Q96EB1 424 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 APMAPQ9HDC9 416 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PRTFDC1Q9NRG1 225 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FAF1Q9UNN5 650 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SRPK3Q9UPE1 567 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 OTOGLQ3ZCN5 2332 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 BLACEA4D250 179 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 H3BNX3 289 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CLDN4O14493 209 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 EMC8O43402 210 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CTNSO60931 367 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TNFRSF21O75509 655 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SCRG1O75711 98 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FBLP22087 321 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TGM1P22735 817 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NBL1P41271 181 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 POLE2P56282 527 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PWWP2BQ6NUJ5 590 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TNFAIP8L2Q6P589 184 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 AGBL5Q8NDL9 886 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SFXN5Q8TD22 340 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NETO1Q8TDF5 533 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 DOK4Q8TEW6 326 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PPWD1Q96BP3 646 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SLC35G5Q96KT7 338 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SPATA9Q9BWV2 254 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GORASP2Q9H8Y8 452 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 C3orf14Q9HBI5 128 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TRPC4Q9UBN4 977 aa13.84□□□□□ -0.19
CDK5RAP3-201ENST00000338399 KIF26BQ2KJY2 2108 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms